LOC122359515


Basic Information

Item Value
gene id LOC122359515
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10820111 ~ 10822197 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252711.1
GATCACCAACCCGCCGTTTAAAACAACGAGCATCAGCGCTGTCGAGCAGCTTCAGTGACCCCTGCCTGTGTCTGGCGCTCTCCGACGGGGTTTGAGGTAAATCTGTGAGAATGCCACAGTTATGCGGCCTCCTCATCACACTTTTATTTGTTGAGACAGTTGCTGAAAAAAAGTACTGTTGGTACTATGAAGGAGATTATCCTGTGTACTTTGtATGCAAAATAT

Function

GO:

id name namespace
GO:0030659 cytoplasmic vesicle membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252711.1 True 225 lncRNA 0.47 3 10820111 10822197

Neighbor

gene id symbol gene type direction distance location
si:dkey-24c2.9 LOC107718082,LOC107689417,LOC107589878 coding upstream 67301 10748820 ~ 10752810 (+)
gorasp1a LOC107688453,LOC107722575,LOC107585269,LOC107689416,LOC107589815,LOC107718085 coding upstream 71770 10742485 ~ 10748341 (+)
csrnp1a LOC107722574,LOC107585280,LOC107689421,LOC107589814,LOC107718084,LOC107683225,LOC107688521 coding upstream 78140 10733916 ~ 10741971 (+)
slc22a13a LOC107722499 coding upstream 113168 10703246 ~ 10706943 (+)
oxsr1a oxsr1a,LOC107718088,LOC107589819,LOC107722611,LOC107585310,LOC107689410,LOC107688448 coding upstream 117326 10692510 ~ 10702785 (+)
LOC122359360 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC106599582 coding downstream 86086 10908283 ~ 10917738 (+)
LOC122361723 gyg1a,LOC107550614,LOC107709894,LOC107722604,LOC107688484,LOC107585020 coding downstream 314904 11137101 ~ 11138828 (+)
map4l si:dkey-77a20.5,LOC107722549,LOC107688456,LOC107676095,LOC107589807,LOC107718078 coding downstream 443094 11265291 ~ 11300035 (+)
nr2f6a nr2f6a,LOC107722588,LOC107688466,LOC107585161,LOC107680251 coding downstream 538142 11360339 ~ 11367651 (+)
angptl4 LOC107585108,LOC107688469,LOC107680254,LOC107709905,LOC107550621,LOC107722496 coding downstream 610892 11433089 ~ 11438717 (+)
LOC122359526 NA non-coding upstream 251103 10567881 ~ 10569008 (+)
G10901 NA non-coding upstream 280121 10421937 ~ 10539990 (+)
G10914 afg3l2,LOC107718155,LOC107688430,LOC107589831 non-coding upstream 337159 10445181 ~ 10482952 (+)
G10918 inhbab,LOC107718177,LOC107589832 non-coding upstream 344828 10470121 ~ 10475283 (+)
G10903 NA non-coding upstream 426961 10392693 ~ 10393150 (+)
G11106 NA non-coding downstream 74486 10896683 ~ 10897497 (+)
G11117 NA non-coding downstream 130853 10953050 ~ 10978280 (+)
G11133 NA non-coding downstream 334341 11156538 ~ 11157341 (+)
G11138 NA non-coding downstream 383546 11205743 ~ 11206038 (+)
G11137 slc12a7a,LOC107589906,LOC107718080 non-coding downstream 386804 11209001 ~ 11211575 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other upstream 101917 10711130 ~ 10718194 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other upstream 155001 10662729 ~ 10665110 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other upstream 658302 10158532 ~ 10161809 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other upstream 903250 9911628 ~ 9916861 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other upstream 1068899 9746570 ~ 9751212 (+)
LOC122359491 tesk2,si:dkeyp-75h12.2,LOC107585988,LOC107679327,LOC107602527,LOC107728975,LOC107714850,LOC107674209,LOC107562290,LOC107668671,LOC107588168,LOC107691921,LOC107753974 other downstream 297657 11119854 ~ 11135991 (+)
kcnh2a kcnh2a,LOC107718079,LOC107589806,LOC107722642,LOC107676096,LOC107586123 other downstream 407563 11229760 ~ 11264234 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other downstream 481481 11303678 ~ 11338469 (+)
mrpl34 LOC107688463,LOC107585198,LOC107722555,LOC107680228 other downstream 517538 11339735 ~ 11341111 (+)
rps28 NA other downstream 599893 11422090 ~ 11444571 (+)

Expression


Co-expression Network