G1470


Basic Information

Item Value
gene id G1470
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 2306406 ~ 2306665 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU1654
TCGATAATAACTGTTCATGATCCCATGATATCATGATATATTTAGTGATATTTGTAAATTGTCTTTCTAAATGTTTTGTTAGCATGTTGCTAATGTAGTGTTAAATGTGGTTAAAGTTACCATTGTTTCTTACTGTATTCACGGAGACCAGAGCCATGTCGTTATTTTCATTTTTAACCCCAAAACGCGTGTAGTCTGTATAATTCATAAACGCATCTTCATTCTTATTGAGTTTCTTCAGCAGTGTAGCTTTAGCCACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1654 True 260 lncRNA 0.35 1 2306406 2306665

Neighbor

gene id symbol gene type direction distance location
CI01000000_02237986_02243555 NA coding upstream 62586 2237694 ~ 2243820 (+)
CI01000000_02092375_02096188 POLR2B.L, RPB2, POLR2B coding upstream 210218 2092293 ~ 2096188 (+)
CI01000000_02080057_02086228 REST coding upstream 218896 2079831 ~ 2087510 (+)
CI01000000_02018856_02033091 EXOSC3 coding upstream 272027 2018597 ~ 2034379 (+)
CI01000000_01996254_01997531 GPR151 coding upstream 308789 1996074 ~ 1997617 (+)
CI01000000_02334112_02352906 NA coding downstream 26890 2333555 ~ 2353369 (+)
CI01000000_02496792_02498535 NA coding downstream 190079 2496744 ~ 2498594 (+)
CI01000000_02516813_02517287 NA coding downstream 210148 2516813 ~ 2517787 (+)
CI01000000_02534790_02541012 NA coding downstream 228125 2534790 ~ 2541023 (+)
CI01000000_02553141_02553901 NA coding downstream 246110 2552775 ~ 2554149 (+)
G1448 NA non-coding upstream 27766 2278390 ~ 2278640 (+)
G1439 NA non-coding upstream 37810 2268384 ~ 2268596 (+)
G1403 NA non-coding upstream 65749 2240290 ~ 2240657 (+)
G1388 NA non-coding upstream 79211 2226995 ~ 2227195 (+)
G1382 NA non-coding upstream 92483 2213187 ~ 2213923 (+)
G1475 NA non-coding downstream 42128 2348793 ~ 2349665 (+)
G1509 NA non-coding downstream 284472 2591137 ~ 2595445 (+)
CI01000000_02639274_02651177 DDX41 non-coding downstream 344100 2639274 ~ 2651578 (+)
G1604 NA non-coding downstream 393009 2699674 ~ 2699896 (+)
G579 NA other upstream 397598 1767917 ~ 1908808 (+)
G435 NA other upstream 873552 1425121 ~ 1432854 (+)
G350 NA other upstream 1629469 671842 ~ 676937 (+)
G252 NA other upstream 1799334 503209 ~ 507072 (+)
G2774 NA other downstream 2147113 4453778 ~ 4454232 (+)
G2850 NA other downstream 2419321 4725986 ~ 4726482 (+)
G6811 NA other downstream 7898166 10204831 ~ 10321679 (+)
G6820 NA other downstream 8120558 10427223 ~ 10433018 (+)
G7018 NA other downstream 8671824 10978489 ~ 10980872 (+)

Expression


Co-expression Network