trnag-gcc_16


Basic Information

Item Value
gene id trnag-gcc_16
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 6049952 ~ 6050026 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_200
gcggtccttggtggttcagtggtagaattctcgcctgccacgcgggagacccgggttcgattcccggccaatgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_200 True 75 tRNA 0.55 1 6049952 6050026

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_15 NA coding upstream 11572 6038306 ~ 6038380 (+)
trnag-gcc_14 NA coding upstream 16475 6033403 ~ 6033477 (+)
trnag-gcc_13 NA coding upstream 18512 6031366 ~ 6031440 (+)
trnag-gcc_12 NA coding upstream 23004 6026874 ~ 6026948 (+)
trnag-gcc_11 NA coding upstream 28912 6020966 ~ 6021040 (+)
trnag-gcc_17 NA coding downstream 27364 6077390 ~ 6077464 (+)
trnag-gcc_18 NA coding downstream 59547 6109573 ~ 6109647 (+)
trnag-gcc_19 NA coding downstream 63611 6113637 ~ 6113707 (+)
crfb16 LOC107676306,LOC107758261,LOC107568418 coding downstream 185844 6235870 ~ 6239694 (+)
mb21d2 mb21d2,LOC107705301,LOC107572431,LOC107673980,LOC105899163 coding downstream 199022 6249048 ~ 6255573 (+)
G9692 cldn15la,LOC107737418,LOC107550432,LOC107695160 non-coding upstream 190000 5852269 ~ 5859952 (+)
G9690 NA non-coding upstream 217262 5832357 ~ 5832690 (+)
G9667 proc,LOC107705314,LOC107653506,LOC107737413 non-coding upstream 218837 5770058 ~ 5831115 (+)
G9671 NA non-coding upstream 324936 5724701 ~ 5725016 (+)
G9663 NA non-coding upstream 332546 5717178 ~ 5717406 (+)
G9697 NA non-coding downstream 92016 6142042 ~ 6142865 (+)
G9758 NA non-coding downstream 326117 6376143 ~ 6376597 (+)
G9825 NA non-coding downstream 452364 6502390 ~ 6502594 (+)
G9827 NA non-coding downstream 462138 6512164 ~ 6512394 (+)
G9834 NA non-coding downstream 472779 6522805 ~ 6523467 (+)
dusp28 dusp28,LOC107737412,LOC107695162,LOC107653509,LOC107705300,LOC107564257 other upstream 223666 5823993 ~ 5826286 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other upstream 440676 5608327 ~ 5609276 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other upstream 1138776 4909129 ~ 4911176 (+)
LOC122361055 LOC107565287,LOC107667819 other upstream 1150572 4898372 ~ 4899380 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other upstream 1460125 4572945 ~ 4589827 (+)
trnag-gcc_20 NA other downstream 170400 6220426 ~ 6220500 (+)
trnag-gcc_21 NA other downstream 172419 6222445 ~ 6222519 (+)
sst2 LOC107549725,LOC107710806 other downstream 317151 6367177 ~ 6367954 (+)
G9887 NA other downstream 640346 6690372 ~ 6690779 (+)
G9889 NA other downstream 641642 6691668 ~ 6692375 (+)

Expression


Co-expression Network