LOC122360578


Basic Information

Item Value
gene id LOC122360578
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14873076 ~ 14874382 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_207
AGATGTATACACAGTTTACACAACTACACTGTGAAACACATACTTattgaaagcatttaaacaattttactCTCCTGTTTACCACTGAATTTATAGTGCCACTGTGAAAGAGTCATTTTCATCGGCTCAGGAGGTTTTAATTAGGGTTCAATTGTGCTTTGAAATTACAGGTGTTAAATGATTTCCGTCACCCATTATTTATACAGATGATttttgtgagtttgtgtgaAAAACGTTCTTGTGATGGTAGCGAGATATGAGAACAGAGGAAACCACGAGGCCATTCTCATTACCTCGTGATTGGCTGATGTTGTTCATAATTCATCAATCTCCTGGAGGACAGATGTAGACATGGCACTGTCTGGAATGATAGCATTTGGGTTGCTGGTACTCTCCATAGATCGTTTCAATGGACAACCCGAGCATTTATCATCGCTGGTGATTAAGGCAAGGGGTAGAACTCTTCGAATCCAATGTCGGGCGGATTCCTCGACGCACGTCATTCATTGGTACAGACTCAAAGATCAAGCTTTCCAAAGATTAATGTACTTCGAAGCAGGATCGAAAACAGCCAAAAACGATCCTGGTGTCCTCAGTAGATATTCTGGATCAGCGGATAAACTAGTGACATTAACTATCTCAACAATGGATGACAGTGATGCTGGCATGTATTACTGCGCGTACTGGAGTGCAGACAACACAGTGCTAGCTGTGAGAGGAAATCATTACAAAAACCTGCGTTCATCATCAAAACTGTTGCTAGAACAACTTCAGCGAAAAAAAGAAGAGTCTCTCTGCATCGTTTAATCGTGGTGTTGCTCAATATTTaagtaacacattttaaataataaatgtttaaaatgtgtacaGCGTCCCAGAAGAGctataataaacacaatatttacTAGATACTGTTTTATAGGTCTACACATTGACTGTTAACAATAAAACGGTAATTCATATCCTGATTTGTATTGCAATTAAAAGAATGTTGTTTCCCTTTTTTCGGTAGCTATATGAAGCTCACATTACCAATActtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_207 True 1041 V_gene_segment 0.58 2 14873076 14874382

Neighbor

gene id symbol gene type direction distance location
nol7 LOC107584088,LOC107713966 coding downstream 20842 14850608 ~ 14852234 (-)
retreg1 fam134b,LOC107751562,LOC107664066,LOC107686060,LOC107713983,LOC107584095 coding downstream 39038 14823155 ~ 14834038 (-)
and2 LOC107713965,LOC107751574,LOC107664022,LOC107585844,LOC107558199 coding downstream 54142 14815436 ~ 14818934 (-)
ralyl LOC107586268,LOC107686092,LOC107713968 coding downstream 60720 14796390 ~ 14812356 (-)
lrrcc1 lrrcc1,LOC107713973,LOC107686059,LOC107584102,LOC107751561,LOC107556739,LOC107664063 coding downstream 76889 14786980 ~ 14796187 (-)
amph amph,LOC107584026,LOC107701027,LOC107556781 coding upstream 10373 14884755 ~ 14908765 (-)
fam49ba fam49ba,LOC107718035,LOC107556887,LOC107713994,LOC107701021,LOC107657432 coding upstream 143987 15018369 ~ 15033769 (-)
asap1a asap1a,LOC107657433,LOC107701019,LOC107556902,LOC107718034 coding upstream 160574 15034956 ~ 15073086 (-)
ubtfl ubtfl,LOC107718032,LOC107583949,LOC107713995,LOC107556934 coding upstream 199303 15073685 ~ 15084154 (-)
slc4a2a slc4a2a,LOC107709836,LOC107657435,LOC107556941,LOC107718031 coding upstream 210980 15085362 ~ 15112144 (-)
G12175 epdr1,LOC107664036,LOC107558964 non-coding downstream 17907 14853694 ~ 14855169 (-)
G12176 LOC107664036,LOC107558964 non-coding downstream 19524 14852910 ~ 14853552 (-)
G12159 NA non-coding downstream 23643 14772490 ~ 14849433 (-)
G12161 NA non-coding downstream 97585 14773753 ~ 14775491 (-)
G12085 NA non-coding downstream 168618 14703637 ~ 14704458 (-)
G12199 NA non-coding upstream 60387 14934769 ~ 14935025 (-)
G12308 NA non-coding upstream 348829 15223211 ~ 15223455 (-)
G12313 ccr9a,LOC107579348,LOC107733890,LOC107657446,LOC107730785,LOC107557055,LOC107700981 non-coding upstream 363577 15237959 ~ 15240826 (-)
LOC122359617 NA non-coding upstream 672653 15547035 ~ 15553604 (-)
LOC122356097 NA non-coding upstream 844246 15718628 ~ 15754422 (-)
adcyap1b adcyap1b,adcyap1,LOC107713980,LOC107686049,LOC107751550,LOC107664073 other downstream 262810 14578995 ~ 14610266 (-)
LOC122328470 ptbp1a,ptbp3,LOC107602545,LOC107674042,LOC107732511,LOC107584874,LOC107558691,LOC107658670,LOC107744247,LOC107729315,LOC107688524 other downstream 1308711 13553773 ~ 13564365 (-)
LOC122323969 cahz,LOC107550722,LOC107755757,LOC107664098,LOC107686019,LOC107585971,LOC107751363,LOC108432254 other downstream 1402813 13315229 ~ 13470263 (-)
xkr4 xkr4,zgc:123035,LOC107728991,LOC107679338,LOC107714844,LOC107674319,LOC106569249 other downstream 2034983 12789524 ~ 12838093 (-)
hltf hltf,LOC107688483,LOC107722619 other downstream 3258138 11592441 ~ 11614938 (-)
faim2a faim2a,LOC107718029,LOC107701017,LOC107556958,LOC107657438,LOC107709826 other upstream 246205 15120587 ~ 15127491 (-)
smarcd3a smarcd3a,smarcd3,LOC107657439,LOC107599876,LOC107709803,LOC107556978,LOC107718026,LOC103039772 other upstream 259589 15133971 ~ 15153989 (-)
ccdc24 ccdc24,LOC107657456,LOC107599905 other upstream 685281 15559663 ~ 15579706 (-)
pappa2 pappa2,LOC107722077,LOC107568983,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other upstream 1350341 16224723 ~ 16268835 (-)
LOC122362257 LOC107658348,LOC107563587,LOC107678922,LOC107726920,LOC107722065,LOC107559085 other upstream 1608778 16483160 ~ 16512019 (-)

Expression


Co-expression Network