LOC122356651


Basic Information

Item Value
gene id LOC122356651
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 16834834 ~ 16836647 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_214
TAACCCtatttaatgctgttaaataaaacagctaAAGCATATATAACGAAGTGACAAACAGgaattatataaaatcttaatatacaaatgtaaattgtAGTTGTAAGCATTAATTTATAGAAGCAAATCAGAATGTGAAGATAAAATTCTTAATATGTAAATCATTAGAAGTAAAACTAAAGTCTGAATATTGCAGTTCATTGTAAATATGTAGTTATAATTCTGAATACATcaatttaaattgcaatatgtaggcacatatttatttgaattaatagctacataaatatatatgtaggtaatataaatatgtattttgatttACTTAATATACACACTCAGAATTATGTATTCTGATAAGCTTCTATATATTCACAGTTTAcatattctgtttttatataattattttgtgttcggcacttcataatatataaaacatatacagttttacattttacattacaaaataatatgaaaacatttacgACCAACATATAATGCTACATATTTACTGTACACTTTGTTAAATCGATGTAATATCTTAATAGTAAAAATTgataaaatatagtaataatagtaaaatatttgttatattatattaatacatctTAATATGTTCTGAATTAGCATGGGTGAGCAGTTTTTCCCtaagaaaattaaaatcaatattaaactgaaaataaaacctgGCTATAGATTAAAACTTTTTCAATATGGAATAAACCTTACCTAAAGGAACAAACGCCAACCTGAAATCATTCACATTcgattttgattttatattttgctatatACACAGCACTTTAAgctataaaatgtacatatacataacaGCGGCTTTTTAAGTCAGTGAGCTACTGTACAGGAACACCAGTTTCTGAGTATGTATCAGCCCCTTGAATTGTATAGCATTTGGTGACACCTGCCAGAGACATCACTGCATATGATTGGCTGCTGAAAACACTAGCTGGGAGCTTCAGTTGTCTGTATGGAGGCTGTTATGGTAGTCCTGCAAAGCTCAGTGAGGAACTCATCATTCTAAACAATGGCTTGCTGTTTGCTACTAGTTTTAATGACATTCATCGGTGCGAGTATTCAAGACAGCATTACCCCAACGTCTCCTGAAGTCTATGCAAAGGCCAATGAAAAAGTGACGCTCTCTTGTAAATACCAGTACACAGTGTCAATGAATAATCTACAGTGGTATCGGCATTACCACAACTCTACGCCGGAGTTTCTGGTTTTAATCATGGAGTCGGGACAGAATCAAACCGCTACGCCTCCTCATCCTCGGCTGACAGCTTCAGTTAATAAAGATAGGACGGTGAATCTAGAAATCTTTCCTGCAGATGTGGAGGACTCTGCTGTGTATTACTGCGCACTGCAGCCCACAGAGACAGGAAACGCTTGAACACCGTACAAAAACCTACTCAGTGCTAAACGGAGAACAAAATTCAGATCGGATCAGCCTTTGAGAGTGCGCACGAAGGCCTCAAGGGGGCAGCACTTTTTATGACGCTGAACAACATCATAAGCATGGGCACAAAGCTGAAATGTGACAAGTGACAGCATGTGACTATGAAAGATTTTGAACAGTCGCACACAGCTGATCAGTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_214 True 1618 V_gene_segment 0.53 2 16834834 16836647

Neighbor

gene id symbol gene type direction distance location
nmnat2 nmnat2,LOC107658365,LOC107563562,LOC107678925,LOC107557267 coding downstream 136211 16688625 ~ 16698623 (-)
tnn tnn,tnw,LOC107722078,LOC107658358,LOC107678933,LOC107726927 coding downstream 349630 16457757 ~ 16485204 (-)
brinp2 brinp2,LOC107658350,LOC107562711,LOC107722070,LOC107720848,LOC107700985 coding downstream 810184 15948412 ~ 16024650 (-)
cenpl cenpl,LOC107720853,LOC107599910,LOC107657424,LOC107722063,LOC107700989,LOC107557192 coding downstream 974743 15856239 ~ 15860091 (-)
eif2b3 eif2b3,LOC107722074,LOC107599900,LOC107700990,LOC107720854,LOC107558289 coding downstream 1001661 15803479 ~ 15833173 (-)
LOC122356645 LOC107709317 coding upstream 11044 16847691 ~ 16849363 (-)
LOC122324462 LOC107709317 coding upstream 15290 16851937 ~ 16852961 (-)
LOC122327065 NA coding upstream 19468 16856115 ~ 16856779 (-)
LOC122327073 LOC107709317 coding upstream 20814 16857461 ~ 16858067 (-)
LOC122355552 LOC107709316,LOC107577925,LOC107658332 coding upstream 21921 16858568 ~ 16859696 (-)
LOC122356623 NA non-coding downstream 10032 16823258 ~ 16824802 (-)
LOC122356666 NA non-coding downstream 12286 16819837 ~ 16822548 (-)
LOC122356638 LOC107558522,LOC107726897,LOC107558467 non-coding downstream 32883 16800431 ~ 16801951 (-)
LOC122356677 NA non-coding downstream 39056 16794348 ~ 16795778 (-)
G12830 NA non-coding downstream 45110 16789255 ~ 16789724 (-)
G12844 LOC107563566,LOC107738189 non-coding upstream 7695 16844342 ~ 16847554 (-)
LOC122328563 NA non-coding upstream 39250 16875897 ~ 16876346 (-)
LOC122327095 NA non-coding upstream 45130 16881777 ~ 16882345 (-)
G12864 NA non-coding upstream 56139 16892786 ~ 16893100 (-)
G12868 NA non-coding upstream 62997 16899644 ~ 16900070 (-)
LOC122356633 NA other downstream 3442 16828935 ~ 16831392 (-)
LOC122356641 LOC107678904 other downstream 6304 16826321 ~ 16828530 (-)
G12843 NA other downstream 8261 16826139 ~ 16826573 (-)
LOC122327057 NA other downstream 8287 16826085 ~ 16826547 (-)
LOC122327046 NA other downstream 9026 16825002 ~ 16825808 (-)
LOC122355584 NA other upstream 24385 16861032 ~ 16861844 (-)
LOC122327077 NA other upstream 26281 16862928 ~ 16863490 (-)
LOC122355559 LOC107709313 other upstream 30104 16866751 ~ 16867660 (-)
LOC122355567 LOC107709307,LOC107709313 other upstream 31450 16868097 ~ 16873019 (-)
LOC122327088 NA other upstream 33578 16870225 ~ 16870796 (-)

Expression


Co-expression Network