trnaw-cca_1


Basic Information

Item Value
gene id trnaw-cca_1
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 23737051 ~ 23737122 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_256
GACCTCGTGGCGCAACGGTagcgcgtctgactccagatcagaaggttgcgtgttcaaatcacgtcggGGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_256 True 72 tRNA 0.55 1 23737051 23737122

Neighbor

gene id symbol gene type direction distance location
pitrm1 pitrm1,LOC107698483,LOC107679400,LOC107724807 coding upstream 21814 23703501 ~ 23715237 (+)
klf6b klf6,LOC107698482,LOC107679408,LOC107572997,LOC107724813,LOC107569266,LOC107728392 coding upstream 34787 23698257 ~ 23702264 (+)
LOC122354999 NA coding upstream 99621 23634222 ~ 23637430 (+)
LOC122354760 NA coding upstream 106678 23625007 ~ 23630373 (+)
mbnl1 mbnl1,LOC107724811,LOC107573627,LOC107745615,LOC107679403,LOC107567699 coding upstream 112185 23563764 ~ 23624866 (+)
LOC122356725 LOC107698487,LOC107737400,LOC107679394,LOC107572992,LOC107728385,LOC107569271,LOC793909 coding downstream 28836 23765958 ~ 23770492 (+)
lpar5a LOC107737401,LOC107698486,LOC107572991,LOC107679392,LOC107728381,LOC107569267 coding downstream 35758 23772880 ~ 23775183 (+)
hes6 hes6,LOC107737402,LOC107572989,LOC107728379,LOC107569265,LOC107679391 coding downstream 46602 23783724 ~ 23786255 (+)
LOC122323665 NA coding downstream 183109 23920231 ~ 23925631 (+)
LOC122323657 NA coding downstream 192509 23929631 ~ 23931889 (+)
G14860 NA non-coding upstream 14304 23722266 ~ 23722747 (+)
G14841 NA non-coding upstream 45191 23690422 ~ 23691860 (+)
G14850 LOC107724821,LOC107698475,LOC107573003,LOC107709797,LOC107680183,LOC107577770 non-coding upstream 53653 23668563 ~ 23683398 (+)
LOC122355031 NA non-coding upstream 93501 23642463 ~ 23643550 (+)
G14837 cul3a,LOC107679386,LOC102194569,LOC105907048,LOC107567698,LOC107724810 non-coding upstream 174699 23558249 ~ 23562352 (+)
G14872 NA non-coding downstream 7749 23744871 ~ 23746553 (+)
G14889 NA non-coding downstream 39981 23777103 ~ 23780120 (+)
G14863 LOC107728390,LOC107572994,LOC107737392,LOC107569272 non-coding downstream 54140 23791262 ~ 23795903 (+)
G14896 per2,LOC107572994,LOC107698490 non-coding downstream 66662 23803784 ~ 23804629 (+)
G14978 NA non-coding downstream 142056 23879178 ~ 23879604 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 189077 23545106 ~ 23547974 (+)
LOC122324535 NA other upstream 731797 23003165 ~ 23005254 (+)
fcer1gl LOC107671799 other upstream 1041721 22691199 ~ 22695330 (+)
LOC122327931 NA other upstream 1062776 22633529 ~ 22674275 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 1251396 22461916 ~ 22485655 (+)
LOC122323670 NA other downstream 198799 23935921 ~ 23939016 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 308563 24045685 ~ 24048465 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other downstream 322290 24059412 ~ 24062202 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other downstream 346716 24083838 ~ 24096897 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 504750 24241872 ~ 24249991 (+)

Expression


Co-expression Network