trnal-uaa_13


Basic Information

Item Value
gene id trnal-uaa_13
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 25049604 ~ 25049686 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_271
ACCAGgatggccgagaggttaaggcgttGGACTTAAGATCCAATGGACAAATGTCCTCGTGGGTTCGAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_271 True 83 tRNA 0.53 1 25049604 25049686

Neighbor

gene id symbol gene type direction distance location
trnal-uaa_12 NA coding upstream 472 25049050 ~ 25049132 (+)
trnal-uaa_11 NA coding upstream 1125 25048397 ~ 25048479 (+)
trnal-uaa_10 NA coding upstream 1682 25047840 ~ 25047922 (+)
trnal-uaa_9 NA coding upstream 2255 25047267 ~ 25047349 (+)
trnal-uaa_8 NA coding upstream 2808 25046714 ~ 25046796 (+)
trnal-uaa_14 NA coding downstream 871 25050557 ~ 25050639 (+)
eef1da eef1da,LOC107713671,LOC107757829,LOC107663523,LOC107599238,LOC107600209,LOC107655868 coding downstream 1584 25051270 ~ 25062510 (+)
lrrc24 lrrc24,LOC107713676,LOC107655866,LOC107600207,LOC107757831,LOC107599237,LOC107663504 coding downstream 40105 25089791 ~ 25110776 (+)
crygn1 crygn1,LOC107600194,LOC107713687,LOC107655847,LOC107558278,LOC107696799,LOC107729968 coding downstream 166802 25216488 ~ 25219623 (+)
LOC122363040 abhd4,LOC107713680,LOC107663512,LOC107655861,LOC107729967 coding downstream 250514 25300200 ~ 25304723 (+)
G15165 NA non-coding upstream 208611 24788885 ~ 24840993 (+)
G15189 LOC107757823 non-coding upstream 233174 24813299 ~ 24816430 (+)
G15169 NA non-coding upstream 252040 24796813 ~ 24797564 (+)
G15071 NA non-coding upstream 446812 24523424 ~ 24602792 (+)
G15069 NA non-coding upstream 536543 24507886 ~ 24513061 (+)
G15225 NA non-coding downstream 56017 25105703 ~ 25210816 (+)
G15236 LOC107558270,LOC107558271,LOC107713634,LOC107655863,LOC107757833 non-coding downstream 61575 25111261 ~ 25115138 (+)
G15240 NA non-coding downstream 73614 25123300 ~ 25145006 (+)
G15233 LOC107600201 non-coding downstream 99569 25149255 ~ 25157235 (+)
G15250 LOC107713636,LOC107655860 non-coding downstream 140334 25190020 ~ 25330287 (+)
zcchc2 zcchc2,LOC107713659,LOC107757820,LOC107599249 other upstream 295013 24687556 ~ 24754591 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other upstream 549919 24493438 ~ 24499685 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other upstream 799613 24241872 ~ 24249991 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other upstream 952707 24083838 ~ 24096897 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other upstream 987402 24059412 ~ 24062202 (+)
G15224 abhd4,LOC107713680,LOC107663512,LOC107655861 other downstream 121050 25170736 ~ 25175288 (+)
LOC122362952 LOC107713688,LOC107600193,LOC107558294,LOC100331938,LOC107729982,LOC107655843,LOC107696796 other downstream 172458 25222144 ~ 25236609 (+)
LOC122327519 hecw1b,hecw1,LOC107600217,LOC107662981,LOC108280656,LOC107576258,LOC107656133 other downstream 344470 25394156 ~ 25406903 (+)
LOC122362387 LOC107722547,LOC107680242,LOC107550619,LOC107688474,LOC107709878 other downstream 442574 25492260 ~ 25516180 (+)
G15410 crsp7,LOC107722610,LOC107688472,LOC107585090,LOC107550620 other downstream 549775 25599461 ~ 25599926 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnal-uaa-57 NA coding NC_048582.1 CM023236.2 44283492 ~ 44283574 (-)