G84487


Basic Information

Item Value
gene id G84487
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 140100 ~ 141081 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU125183
ACCCGCTAGTGACGGCCCTGCACCGACACCTGGTGCTCTTCAACAGGgtgcgCAGGCCTCAGGGTGAGAGTGAGTCGTATCTGCTGGTCTGCGCTGAAGGGACTGAACTACAGCTGTGGGAGCGACGCGGCAGCGCCGATCTGTGCTGAAGAGCACTAGAGAGTCGCAGTCTGATCTCTTCTTCTCCGCTCTTCAGCTCCGGTCTATAAAGCCTTTCAGCATCACGGGCACAGAAAAGCTCACAGCCAGGACTCTGATTCACGTTTACAAGCGTTTCCAGCTCCATATTCGATTGCGCTCATATTCTGAAATATGCCGCTTATATACAGAAATATGGTTGTTTCAGGTCTGCTGATCTACACGTGTTATAACACAAGAGAGTCCAGATGCTGCCGCCGGTTCTGCAGTGTGTgctcagttattatttttattaaaacttaaacaCGGTTTAATTAGAGACCCTTCGAAAAGTCCTAAAACTCTGACTCGAACTGGAAAGAGTTGTTCTTATTTGATTGCCACTTCACAAATCAGTTTCCATTCCTTAACATCTATAGCTAATTATCATCACCCATAATTCTGTGCAGTCTGAGCATGTGACTCTCCTTTCAGGTGATTTTCTGAATGAGGTGTTTACATGCAGCTCTTTTCTCTGAAAACCACCTCATCCCTGAAGAACGAGTCAGAGGACAACGATACAGAGTCTAGGTCAAAACgatca

Function

GO:

id name namespace
GO:0042594 response to starvation biological_process
GO:0004175 endopeptidase activity molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function
GO:0017171 serine hydrolase activity molecular_function

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU125183 True 721 lncRNA 0.47 2 140100 141081

Neighbor

gene id symbol gene type direction distance location
LOC122355848 akt2l,akt2,LOC107722100,LOC107671613,LOC105023568,LOC107711004 coding downstream 28974 103795 ~ 111126 (-)
LOC122355847 LOC107690849,LOC107671610,LOC107710396,LOC107565533,LOC107575145,LOC107575144 coding downstream 77057 44012 ~ 63043 (-)
LOC122355205 dlx4b,LOC107739765,LOC107664616,LOC107708902,LOC107557342 coding upstream 30681 171762 ~ 176703 (-)
LOC122355756 LOC107660458 coding upstream 52652 193733 ~ 208068 (-)
LOC122355212 LOC107561990,LOC107575498 coding upstream 77133 218214 ~ 222873 (-)
LOC122355214 LOC107561990,LOC107575498 coding upstream 82797 223878 ~ 228330 (-)
LOC122355215 vkorc1,LOC107719575,LOC107598672,LOC107654009,LOC108413442 coding upstream 92185 233266 ~ 234678 (-)
G84492 LOC107565537,LOC107671635,LOC107690840 non-coding downstream 50526 88055 ~ 89574 (-)
LOC122355221 LOC107561990,LOC107660458 non-coding upstream 55820 196901 ~ 197393 (-)
LOC122355220 LOC107561990,LOC107660458 non-coding upstream 56319 197400 ~ 198867 (-)
LOC122355197 NA non-coding upstream 241491 382572 ~ 385022 (-)
LOC122355423 NA non-coding upstream 244808 385889 ~ 386457 (-)
G84547 NA non-coding upstream 336942 478023 ~ 478431 (-)
G84486 emsy,LOC107671635,LOC107690840,LOC107722098,LOC107565537,LOC107747365 other downstream 10115 78617 ~ 129985 (-)
G84485 vaspa,LOC107722097,LOC107565535,LOC107710395,LOC107671612,LOC107575450 other downstream 17333 12045 ~ 122767 (-)
LOC122355191 dusp3b,LOC107753093,LOC107590411,LOC107688089,LOC107709997 other upstream 26967 168048 ~ 171295 (-)
G84521 NA other upstream 178249 319330 ~ 321260 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other upstream 199192 340273 ~ 360482 (-)
LOC122355759 NA other upstream 343357 484438 ~ 490379 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other upstream 355883 496964 ~ 500219 (-)

Expression


Co-expression Network