G84492 (LOC107565537,LOC107671635,LOC107690840)


Basic Information

Item Value
gene id G84492
gene name LOC107565537,LOC107671635,LOC107690840
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 88055 ~ 89574 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU125191
GCACATGTCCCGGTGAAGATCACCTTCACCAAACCCTCCACCCAGACCACCAACAGCACCACCCAGAAGGTGATAATCGTGACCACGTCTCCCAGCTCCAACTTTGTGCCGAACATCTTGTCCAAGTCCCACAACTACGCTGCCGTGTCTAAGCTTGTGTCGAGCGCCGCGCTCACCGCCTCCAGCCACAAACAGACCATGGTGATCTCAGCCGGCTCCGCCGCGGCCCCGGGGCCCAGTCCTGTCGCCGTGACGACCATGGTGTCCTCCACTCCTTCGGTGGTGATGTCCACCATCGCgcagggcggCTCGTCGCGGCGGTGAGAGTGGCCTCCACTCGTCTGCCGTCTCCTAAGGCTCTGGTCAGCTCTCCGTCTCAGATCCTGCA

Function

NR:

description
PREDICTED: BRCA2-interacting transcriptional repressor EMSY-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125191 True 388 lncRNA 0.62 3 88055 89574

Neighbor

gene id symbol gene type direction distance location
LOC122355847 LOC107690849,LOC107671610,LOC107710396,LOC107565533,LOC107575145,LOC107575144 coding downstream 25012 44012 ~ 63043 (-)
LOC122355848 akt2l,akt2,LOC107722100,LOC107671613,LOC105023568,LOC107711004 coding upstream 14221 103795 ~ 111126 (-)
LOC122355205 dlx4b,LOC107739765,LOC107664616,LOC107708902,LOC107557342 coding upstream 82188 171762 ~ 176703 (-)
LOC122355756 LOC107660458 coding upstream 104159 193733 ~ 208068 (-)
LOC122355212 LOC107561990,LOC107575498 coding upstream 128640 218214 ~ 222873 (-)
LOC122355214 LOC107561990,LOC107575498 coding upstream 134304 223878 ~ 228330 (-)
G84487 NA non-coding upstream 50526 140100 ~ 141081 (-)
LOC122355221 LOC107561990,LOC107660458 non-coding upstream 107327 196901 ~ 197393 (-)
LOC122355220 LOC107561990,LOC107660458 non-coding upstream 107826 197400 ~ 198867 (-)
LOC122355197 NA non-coding upstream 292998 382572 ~ 385022 (-)
LOC122355423 NA non-coding upstream 296315 385889 ~ 386457 (-)
G84493 NA other upstream 1916 91490 ~ 93801 (-)
LOC122355191 dusp3b,LOC107753093,LOC107590411,LOC107688089,LOC107709997 other upstream 78474 168048 ~ 171295 (-)
G84521 NA other upstream 229756 319330 ~ 321260 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other upstream 250699 340273 ~ 360482 (-)
LOC122355759 NA other upstream 394864 484438 ~ 490379 (-)

Expression


Co-expression Network