LOC122355191 (dusp3b,LOC107753093,LOC107590411,LOC107688089,LOC107709997)


Basic Information

Item Value
gene id LOC122355191
gene name dusp3b,LOC107753093,LOC107590411,LOC107688089,LOC107709997
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 168048 ~ 171295 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU125201
AGCACACAAAGACGGTACGGGCTGCAGTTAACTCTCTAGGCCTAACTAACTAAAACAGCTCACAGATGAATGCGAACCGCTCTAGAATTATTTAAGTTGAACACTGACCAGTGGACTAAAATCGCTGGACCATTATTCGGTACTCTAAAAGAGGACTCGATGAAGATGGAACCGGATTATTGAAAATCCCATCAGAACCGAGGCCCGGGGGAAAGGTATTTTCTACTTGAAAGGCAATTTATCTTGAACCGAACATGACAGACTATGAAGTGTCTGTTCAGCAGCTCAACGATCTGTTGACAGATGAAAACGGTGACTTCTGTATGCCctccaaacattttaatgaagtcTGCTCTGGGATACTCCTAGGAAATGAGCAGGGTGTATGTACACTGTCAGAAAGGCTACAGTCGTTCTGCTGCGCTGGTCGTCGCACACCTGATGCTTCAGCACGAGATGGACGTACGAGCCGCTGTGGCCACAGTGAGAGAGAAACGTGAGATCGGGCCCAACGACGGATTCCTGCGCCAGCTCTGCTGTCTGAACGACAGGCTGGCAACCGAAGGAAGGCTGTGTGTTCATCAGacctaaatatatatgcattttaagcGTTTTTATTATCTAAATGTTAGCGTTTCTCTTTAGTATCTTCTGCCCTCTAGCGGTATTGATAAACGTAGTTTATCCAGCACAAAGTGtcaaaggaaaagttcaccccaaaattatttACTAACCCACATATGTatacttgtctttttttatgttgaacttaaaaagaagatattttgactgCGGAAGTCAATCATTGATTCGACCATTTGTTTGATtgccagcattcttcaaaatatcttttattgtgTTCAGCATCAGAAAGAAGCTCATTCAAGGTTGGCACGGGGCGAGTAAATGAggacaatataaaaaattttatgcgtactatttctttaaaaccatATGCCCTTCTCTAGCTCTCTATATACACATAAGCATAGCTGCTCGGACACATAGGCTATAAATTCCTGGTATTTTTTGCTATAAAGTCTTTTTACCCTTTTTGTGTAGCCAGTGATAATTACAGCTTTCTCCCAAATAATCAAACACAAGACGTCTTCACAACAGACaacaatcatttattaaacatctTTAAAGTGAAAAGTAGCACACATACCTGAGTTACTTTTAAACCCCTCCCACACACTCTGCTTTCGGTAttgaacacacatatattctgATTGTATAGCTGCAAATAGGATCGTTTTTATTAATCATGTTCCTG
>XM_043253241.1
GTGGTTTGAAGCACACAAAGACGGTACGGGCTGCAGTTAACTCTCTAGGCCTAACTAACTAAAACAGCTCACAGATGAATGCGAACCGCTCTAGAATTATTTAAGTTGAACACTGACCAGTGGACTAAAATCGCTGGACCATTATTCGGTACTCTAAAAGAGGACTCGATGAAGATGGAACCGGATTATTGAAAATCCCATCAGAACCGAGGCCCGGGGGAAAGGTATTTTCTACTTGAAAGGCAATTTATCTTGAACCGAACATGACAGACTATGAAGTGTCTGTTCAGCAGCTCAACGATCTGTTGACAGATGAAAACGGTGACTTCTGTATGCCctccaaacattttaatgaagtcTGCTCTGGGATACTCCTAGGAAATGAGTCTGTAGCTACAAATGTAACGCGTTTGCATCAGCTGGGAGTGACACACGTCCTCAACGCTGCAGAAGGCCGGTCGGACATGCATGTGAACACGGACGCGGAGTACTATGCAGACACAGGGATCATCTATCACGGGATACCAGCCTTTGACACCGACCACTTTGACCTCAGTGTATATTTTGAAGAAGCTTCCAATTTCATTGAAAGAGCTTTGGCTATGCAAGGCAGGGTGTATGTACACTGTCAGAAAGGCTACAGTCGTTCTGCTGCGCTGGTCGTCGCACACCTGATGCTTCAGCACGAGATGGACGTACGAGCCGCTGTGGCCACAGTGAGAGAGAAACGTGAGATCGGGCCCAACGACGGATTCCTGCGCCAGCTCTGCTGTCTGAACGACAGGCTGGCAACCGAAGGAAGGCTGTGTGTTCATCAGacctaaatatatatgcattttaagcGTTTTTATTATCTAAATGTTAGCGTTTCTCTTTAGTATCTTCTGCCCTCTAGCGGTATTGATAAACGTAGTTTATCCAGCACAAAGTGtcaaaggaaaagttcaccccaaaattatttACTAACCCACATATGTatacttgtctttttttatgttgaacttaaaaagaagatattttgactgCGGAAGTCAATCATTGATTCGACCATTTGTTTGATtgccagcattcttcaaaatatcttttattgtgTTCAGCATCAGAAAGAAGCTCATTCAAGGTTGGCACGGGGCGAGTAAATGAggacaatataaaaaattttatgcgtactatttctttaaaaccatATGCCCTTCTCTAGCTCTCTATATACACATAAGCATAGCTGCTCGGACACATAGGCTATAAATTCCTGGTATTTTTTGCTATAAAGTCTTTTTACCCTTTTTGTGTAGCCAGTGATAATTACAGCTTTCTCCCAAATAATCAAACACAAGACGTCTTCACAACAGACaacaatcatttattaaacatctTTAAAGTGAAAAGTAGCACACATACCTGAGTTACTTTTAAACCCCTCCCACACACTCTGCTTTCGGTAttgaacacacatatattctgATTGTATAGCTGCAAATAGGATCGTTTTTATTAATCATGTTCCTGCATGTGAAAATATGATCTTAATTAATTGTTAGTTACTACATGCAAATATAATTGCTCAAAGCAAatgcaaatatga
>XM_043253242.1
GTGGTTTGAAGCACACAAAGACGGTACGGGCTGCAGTTAACTCTCTAGGCCTAACTAACTAAAACAGCTCACAGATGAATGCGAACCGCTCTAGAATTATTTAAGTTGAACACTGACCAGTGGACTAAAATCGCTGGACCATTATTCGGTACTCTAAAAGAGGACTCGATGAAGATGGAACCGGATTATTGAAAATCCCATCAGAACCGAGGCCCGGGGGAAAGATGAAAACGGTGACTTCTGTATGCCctccaaacattttaatgaagtcTGCTCTGGGATACTCCTAGGAAATGAGTCTGTAGCTACAAATGTAACGCGTTTGCATCAGCTGGGAGTGACACACGTCCTCAACGCTGCAGAAGGCCGGTCGGACATGCATGTGAACACGGACGCGGAGTACTATGCAGACACAGGGATCATCTATCACGGGATACCAGCCTTTGACACCGACCACTTTGACCTCAGTGTATATTTTGAAGAAGCTTCCAATTTCATTGAAAGAGCTTTGGCTATGCAAGGCAGGGTGTATGTACACTGTCAGAAAGGCTACAGTCGTTCTGCTGCGCTGGTCGTCGCACACCTGATGCTTCAGCACGAGATGGACGTACGAGCCGCTGTGGCCACAGTGAGAGAGAAACGTGAGATCGGGCCCAACGACGGATTCCTGCGCCAGCTCTGCTGTCTGAACGACAGGCTGGCAACCGAAGGAAGGCTGTGTGTTCATCAGacctaaatatatatgcattttaagcGTTTTTATTATCTAAATGTTAGCGTTTCTCTTTAGTATCTTCTGCCCTCTAGCGGTATTGATAAACGTAGTTTATCCAGCACAAAGTGtcaaaggaaaagttcaccccaaaattatttACTAACCCACATATGTatacttgtctttttttatgttgaacttaaaaagaagatattttgactgCGGAAGTCAATCATTGATTCGACCATTTGTTTGATtgccagcattcttcaaaatatcttttattgtgTTCAGCATCAGAAAGAAGCTCATTCAAGGTTGGCACGGGGCGAGTAAATGAggacaatataaaaaattttatgcgtactatttctttaaaaccatATGCCCTTCTCTAGCTCTCTATATACACATAAGCATAGCTGCTCGGACACATAGGCTATAAATTCCTGGTATTTTTTGCTATAAAGTCTTTTTACCCTTTTTGTGTAGCCAGTGATAATTACAGCTTTCTCCCAAATAATCAAACACAAGACGTCTTCACAACAGACaacaatcatttattaaacatctTTAAAGTGAAAAGTAGCACACATACCTGAGTTACTTTTAAACCCCTCCCACACACTCTGCTTTCGGTAttgaacacacatatattctgATTGTATAGCTGCAAATAGGATCGTTTTTATTAATCATGTTCCTGCATGTGAAAATATGATCTTAATTAATTGTTAGTTACTACATGCAAATATAATTGCTCAAAGCAAatgcaaatatga

Function

symbol description
dusp3b Predicted to enable protein tyrosine phosphatase activity and protein tyrosine/serine/threonine phosphatase activity. Predicted to act upstream of or within protein dephosphorylation. Predicted to be located in cytoplasm. Orthologous to human DUSP3 (dual specificity phosphatase 3).

NR:

description
PREDICTED: dual specificity protein phosphatase 3-like

GO:

id name namespace
GO:0050860 negative regulation of T cell receptor signaling pathway biological_process
GO:0050868 negative regulation of T cell activation biological_process
GO:0046329 negative regulation of JNK cascade biological_process
GO:0006470 protein dephosphorylation biological_process
GO:0070373 negative regulation of ERK1 and ERK2 cascade biological_process
GO:0000188 inactivation of MAPK activity biological_process
GO:0045931 positive regulation of mitotic cell cycle biological_process
GO:0005829 cytosol cellular_component
GO:0005654 nucleoplasm cellular_component
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0033549 MAP kinase phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125201 False 1276 lncRNA 0.41 2 168124 171286
XM_043253241.1 True 1585 mRNA 0.41 3 168048 171295
XM_043253242.1 False 1497 mRNA 0.41 4 168048 171295

Neighbor

gene id symbol gene type direction distance location
LOC122355848 akt2l,akt2,LOC107722100,LOC107671613,LOC105023568,LOC107711004 coding downstream 56922 103795 ~ 111126 (-)
LOC122355847 LOC107690849,LOC107671610,LOC107710396,LOC107565533,LOC107575145,LOC107575144 coding downstream 105005 44012 ~ 63043 (-)
LOC122355205 dlx4b,LOC107739765,LOC107664616,LOC107708902,LOC107557342 coding upstream 467 171762 ~ 176703 (-)
LOC122355756 LOC107660458 coding upstream 22438 193733 ~ 208068 (-)
LOC122355212 LOC107561990,LOC107575498 coding upstream 46919 218214 ~ 222873 (-)
LOC122355214 LOC107561990,LOC107575498 coding upstream 52583 223878 ~ 228330 (-)
LOC122355215 vkorc1,LOC107719575,LOC107598672,LOC107654009,LOC108413442 coding upstream 61971 233266 ~ 234678 (-)
G84487 NA non-coding downstream 26967 140100 ~ 141081 (-)
G84492 LOC107565537,LOC107671635,LOC107690840 non-coding downstream 78474 88055 ~ 89574 (-)
LOC122355221 LOC107561990,LOC107660458 non-coding upstream 25606 196901 ~ 197393 (-)
LOC122355220 LOC107561990,LOC107660458 non-coding upstream 26105 197400 ~ 198867 (-)
LOC122355197 NA non-coding upstream 211277 382572 ~ 385022 (-)
LOC122355423 NA non-coding upstream 214594 385889 ~ 386457 (-)
G84547 NA non-coding upstream 306728 478023 ~ 478431 (-)
G84486 emsy,LOC107671635,LOC107690840,LOC107722098,LOC107565537,LOC107747365 other downstream 38063 78617 ~ 129985 (-)
G84485 vaspa,LOC107722097,LOC107565535,LOC107710395,LOC107671612,LOC107575450 other downstream 45281 12045 ~ 122767 (-)
G84521 NA other upstream 148035 319330 ~ 321260 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other upstream 168978 340273 ~ 360482 (-)
LOC122355759 NA other upstream 313143 484438 ~ 490379 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other upstream 325669 496964 ~ 500219 (-)
ifnphi4 LOC107653919,LOC107732171,LOC107598640,LOC107664622,LOC107708945,LOC107557348 other upstream 371951 543246 ~ 552443 (-)

Expression


Co-expression Network