G84666 (slc35g1,si:ch211-197g18.2,LOC107598601,LOC107654036,LOC107664634,LOC107664593,LOC107557359,LOC107708939)



Basic Information


Item Value
gene id G84666
gene name slc35g1,si:ch211-197g18.2,LOC107598601,LOC107654036,LOC107664634,LOC107664593,LOC107557359,LOC107708939
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 660089 ~ 663746 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU125504
GCGAGGTAagaatctttcatttatttcaactaCTAAAGCTCAAAAGTCATATAAATATGCAAGGTGAAATCTACAGCAGGCATTATTCAAATCGACAACcttgttcaataaataatatggAGGGATATGCTCTTACATTAATGTATCattaacataaaatgtcatcagatttaaaaaaaaaaaaaaaaaaaaaaaatgaaggcagCATGTCCAGAAATTGCTGGTGATGTATCAGTAAACCATTAATAGTGCTTTTAATGACGAAAAACTGACACAACAAGTCAGTGTAAAGTGCTTTTAGGTCAGTTTACACAAAcaggtttaaataaaatgttcaaattaaataaatgtaaagggAAAACACACCCATGTCAGAGCGACTGAATTTCAGAATAGTCCATACTGACAGTCACAGCCGCTTGTAACAACTCACAATAAGTCATCTCTGTGCCAAGACACATGTccgataaataaataagtgtgaCTCATTCTATATCAGGCAAATATTTGTGAAACGAACATGTGCGTATGTCTAAAGTACATAAGGACAGAGTTCAAGTGGTTCATGAAGGTTCAGAACGTATTACTGATTGCATATTTAAGCACATATAATTCAGAATTTACCAGAACAGACCTTAATATGTAGTAGGCAAAAATATACAGACGCACTGTTGACCctgtgttttccttttaaaaaaaataataccagATACAGTACACCGTCAACAACAAAGTGCAAAgggttttaaagggatagtttgtaccaaaaaataaaattgtcgTCGTTTATCGCGTTTATCCTCGTGTCAGTCCAAATTTCCTTCCATGACGGAAAAATTGAGATGTTTGGCAGAATGTTCActctgctcttttccatacaatgaaaacGAGTGGGATGCAATGAGAAACGGCATTTGGCATCATTCACGTCAAGTGGACGATGACAAACAGACCTAAAGAAAAACCACTTCGGTTTCAGTGCTGTCCTCATTCAAATCAACCGCGTGACTTGAAATGGTATGTATTAAATGTGTACTTATTTTGTAGTGTTTATTtccctatttttttaatttcagtcattAAGCATAGGTTCCAATTTATTAGAAGTTATGGAATATGTACGGAATGTATGGAAAAGAATCAAAAAACCATCTCCAAAAACCATACTGCTATGCAAAGGCATGAGTGTGAGAGTAAAAGATTTGGTGATCTTTCGATTGTTATGCTGTCTACTGTACTCTCTATATGATAAAGCAGCACTGTCTCAAAAGTAGtatcttgataaaaaaaaatatctgtcgTCTTCACACAAGAATATTGAATTTTAGGAAACTACAAAACCTCTAAAAAATACTGTCATATACTTGCATACAGTATGGTCCTGATCTCAGACTCTCGATGTATATTGTTAAAGTAATATAGCTTCTTTGGTATCTAATGTAGCAATTATTTGTAGCAAACATAAAAAACGCTTTTTTCATCTCACTATAATACGCAATCAGCTCTTATTTTTTGTGCTGTTATACCACTTCCTTACGGCCACCCCACTGGTGCTGCTAATCACGCACAGCGCTCCCCCCAGACTCCACCACGTGGGTTTTCGGTTGAGGAACAGGAACTGCAGAATGAACGCCAGGACCACGTCCATCGTCCTCATCAGTGCAACAGGCCCTGCTTTCTCGATCTGCAGGGCTTTGGTGAGGAACGTCTGGCCGGCGATGCCGAGCAGCCCGATGGCCATGAGCGTCCACCTGTCCCAGCCGCAGGACGGGACGGTCCATTCGTCCAAGATGAACAAAACAATAACGCACTCCAGGAGCCCCAGAACTGCATAGTACCACACGGAGAGGTAGTAATGAACGCTTTTCCCTATCTTTCTCAGAATGACCATAGTGCAGGCCGCTCCGATCGCCCCTGTGAAGGCGGCCGCCGTGCCTTTTATGTGACTGGTGTAGTCGCCTTCGATCCCAGACAGCTCGCCACCGAAGAGGAAGGGAGGTCTGGCTATCAGTATGACCCCGGTGAGCGTAAACGCGGTAAAAACCACGTCCCATATGGTGCACCTCTCCTTAAGGAAAATCCAAGCCAGTAAGGAGGTGAAGACCGGATTGCTGAACATTATAACTGTGGCATCGGCTAGGGGCATCTGTAGAACCGCGTAATATAACAAGATCATGGCGTTGGAGCCCAGGAACCCTCTGAGGAACAGGTAGATTCGCATACCTCTTGGTCCCAAAAAACcCATACTTGTAATATATCATGGCTGGCATGACAAACAGCATCTGGAAGAAGCACCGTATTGCACTGATTTCGATGGCGTGCATCCCCTCGATTTTCTTCACAAGAAGAGCTGCAGCAGAGAAGAAAACGGATGCTAACAAGGAGTACAGCAGGCCCAGCCCTGGACACGCCGGTTTCTTTTCTGTGGATGAACGTAACGAAACACTTTTACATCCCAGGACAGTGAGAAAAATGATCAGTTTTGAATGCATAAACAAGTATTTGCTGAGAAAAGCCACTAAATGCAAACAATTTAGGGAAATTATCTTTGTGACCAAGGTTGAACAAaactcagatttaaaaaaaatgattgtgaaTTTAAATTTGGCCACCAACCACAAGAAAGGAAATTGACTAAACTGCAAAAATGGCCATTAAATTTCTGTATAACTTCAGGGTTTTACGGCAGAGTTTACAACAAActgattcacaaaaaaaaggcataattgCTCCAATGGTggaaaaataatttagtaatttacatcaaaatttgtgatgtttttttat

Function


symbol description
si:ch211-197g18.2 Predicted to be involved in calcium ion export across plasma membrane and regulation of cytosolic calcium ion concentration. Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum membrane and plasma membrane. Predicted to be integral component of membrane. Orthologous to human SLC35G1 (solute carrier family 35 member G1).
slc35g1 Involved in calcium ion export across plasma membrane and regulation of cytosolic calcium ion concentration. Located in endoplasmic reticulum membrane and plasma membrane.

NR:

description
PREDICTED: solute carrier family 35 member G1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU125504 True 2787 lncRNA 0.40 2 660089 663746

Neighbor


gene id symbol gene type direction distance location
fra10ac1 fra10ac1,LOC107664625,LOC107654038,LOC107708941,LOC107557362,LOC107743956 coding downstream 9901 640871 ~ 650188 (-)
rbp4 rbp4,LOC107743953,LOC107664626,LOC107598599,LOC107557363,LOC107653948 coding downstream 33567 623911 ~ 626522 (-)
LOC122355758 NA coding downstream 182550 469843 ~ 477539 (-)
LOC122355175 NA coding downstream 215264 439870 ~ 444825 (-)
mapta LOC107598589,LOC107732173,LOC107654024,LOC107664605 coding downstream 225813 407356 ~ 434276 (-)
noc3l noc3l,LOC107664623,LOC107654039,LOC107743960 coding upstream 72902 736648 ~ 745103 (-)
tbc1d12b LOC107743959,LOC107654040,LOC107708937,LOC107664632 coding upstream 82521 746267 ~ 762604 (-)
LOC122355750 LOC107654041 coding upstream 114755 778501 ~ 797724 (-)
abi3b abi3b,LOC107654042,LOC107598650,LOC107743966,LOC107664617,LOC107708878 coding upstream 135075 798821 ~ 802802 (-)
itga3b itga3,itga3b,LOC107708875,LOC107664597,LOC107557321 coding upstream 174068 837814 ~ 867877 (-)
G84654 NA non-coding downstream 48242 610067 ~ 611847 (-)
G84547 NA non-coding downstream 181658 478023 ~ 478431 (-)
LOC122355423 NA non-coding downstream 273632 385889 ~ 386457 (-)
LOC122355197 NA non-coding downstream 275067 382572 ~ 385022 (-)
LOC122355220 LOC107561990,LOC107660458 non-coding downstream 461222 197400 ~ 198867 (-)
G84700 NA non-coding upstream 96179 759925 ~ 789003 (-)
LOC122355303 NA non-coding upstream 102908 766654 ~ 769898 (-)
LOC122355070 NA non-coding upstream 283281 947027 ~ 979785 (-)
G84793 prkg1,prkg1b,LOC107695529,LOC107654050 non-coding upstream 401187 1064933 ~ 1065345 (-)
LOC122355531 NA non-coding upstream 485193 1148939 ~ 1172741 (-)
ifnphi4 LOC107653919,LOC107732171,LOC107598640,LOC107664622,LOC107708945,LOC107557348 other downstream 107646 543246 ~ 552443 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other downstream 159870 496964 ~ 500219 (-)
LOC122355759 NA other downstream 169710 484438 ~ 490379 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other downstream 299607 340273 ~ 360482 (-)
G84521 NA other downstream 338829 319330 ~ 321260 (-)
dlx4b dlx4b,LOC107739765,LOC107557342,LOC107708902 other upstream 225964 889710 ~ 897517 (-)
ank3b ank3b,LOC107654059,LOC107695539 other upstream 1150337 1814083 ~ 1947412 (-)
jmjd1cb jmjd1c,LOC107745648,LOC107654065,LOC107695544 other upstream 1510242 2173988 ~ 2285052 (-)
G85232 LOC107663296,LOC107583514,LOC107733536 other upstream 2104162 2767908 ~ 2781353 (-)
LOC122355711 rara,LOC107700643,LOC107717720,LOC107565243,LOC107563215,LOC107719850,LOC108434941,LOC108261354,LOC107554136,LOC107737746,LOC108276117 other upstream 2425883 3089629 ~ 3103315 (-)

Expression



Co-expression Network