G84804


Basic Information

Item Value
gene id G84804
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 1178535 ~ 1179376 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU125710
AGCGTTTTATAAAACTAGAAGTTGGAGTAATCTTgacacaaaaactgaaaacattttagtttatctCATCAACCCAATGACAAAACATGTCTTACCTTCCAGTCAAGAGTTCATACATAAGAATTCCCAATGACCAGTAGTCTGCTGAGATATCATGGCCTTTATTCAGTATGATCTCTGGGGCTACATACTCTGGCGTTCCGCAGAATGTCCAAGTTTTCTTCCCAAATCCAATCTTTTTAGCGAATCCAAAGTCCAAGCTTGGCATATCCTCTATGATCCAGAATGAGATTTTCTGGCTTTAAATCACGATAAATTATTCCTTTGGAATGCAAGTAAGCGAAGGCTTCAACCACACAGGCTGTATAAAACCGTGTAGTGGAGTCTTCAAATGATCCTCTacgaataaagaaagaaaaacacttctgtTTTACTAGATTTCAATAACAGAGTGATTACCACTAGCCATCATCATAGGAACACCTTGGCTACCTGTCTCTAAGAATGGTCCAAAGCTCTCCTCCTAGACAGGCCTCCATCAACATGTACAGATATTTACTGTCTTTGAAAGTCCTGTACA

Function

GO:

id name namespace
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125710 True 580 lncRNA 0.39 2 1178535 1179376

Neighbor

gene id symbol gene type direction distance location
a1cf a1cf,LOC107654048,LOC107739758,LOC107695528,LOC107708930 coding downstream 122101 1045416 ~ 1056434 (-)
aarsd1 aarsd1,LOC107739756,LOC107695514,LOC107708900,LOC107598654 coding downstream 161305 1009987 ~ 1017230 (-)
g6pc1a.1 LOC107654044,LOC107598610,LOC107739755,LOC107708934,LOC107695523 coding downstream 173460 999187 ~ 1005075 (-)
kat7b kat7b,kat7,LOC107598609,LOC107739754,LOC107708935,LOC107654043,LOC108443263 coding downstream 188287 983000 ~ 990248 (-)
itga3b itga3,itga3b,LOC107708875,LOC107664597,LOC107557321 coding downstream 310658 837814 ~ 867877 (-)
pcdh15b pcdh15b,pcdh15,LOC107654051,LOC107695531,LOC106578947,LOC106589399 coding upstream 38051 1217427 ~ 1374084 (-)
ipmkb ipmk,ipmkb,LOC107746459,LOC107654052,LOC107708928,LOC107695532 coding upstream 448787 1628163 ~ 1641997 (-)
ube2d1b ube2d1b,ube2d1,LOC105891213,LOC107717106,LOC106607701,LOC107553913,LOC107733527 coding upstream 463458 1642834 ~ 1648762 (-)
zgc:171971 zgc:171971,LOC107695535,LOC107596590 coding upstream 473073 1652449 ~ 1658747 (-)
fam13c fam13c,LOC107654055,LOC107727053,LOC107596592,LOC107695537,LOC107746461 coding upstream 582422 1761798 ~ 1774365 (-)
LOC122355531 NA non-coding downstream 5794 1148939 ~ 1172741 (-)
G84793 prkg1,prkg1b,LOC107695529,LOC107654050 non-coding downstream 113190 1064933 ~ 1065345 (-)
LOC122355070 NA non-coding downstream 198750 947027 ~ 979785 (-)
G84700 NA non-coding downstream 389532 759925 ~ 789003 (-)
LOC122355303 NA non-coding downstream 408637 766654 ~ 769898 (-)
LOC122355293 NA non-coding upstream 366177 1545553 ~ 1546494 (-)
G84882 NA non-coding upstream 406373 1585749 ~ 1585950 (-)
G84885 NA non-coding upstream 420481 1599857 ~ 1604799 (-)
G84884 NA non-coding upstream 446919 1626295 ~ 1628036 (-)
G84892 NA non-coding upstream 470085 1649461 ~ 1650134 (-)
dlx4b dlx4b,LOC107739765,LOC107557342,LOC107708902 other downstream 281018 889710 ~ 897517 (-)
ifnphi4 LOC107653919,LOC107732171,LOC107598640,LOC107664622,LOC107708945,LOC107557348 other downstream 626092 543246 ~ 552443 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other downstream 678316 496964 ~ 500219 (-)
LOC122355759 NA other downstream 688156 484438 ~ 490379 (-)
prr12a prr12a,LOC107708947,LOC107664611,LOC107598586,LOC107654018,LOC107732166 other downstream 818053 340273 ~ 360482 (-)
ank3b ank3b,LOC107654059,LOC107695539 other upstream 634707 1814083 ~ 1947412 (-)
jmjd1cb jmjd1c,LOC107745648,LOC107654065,LOC107695544 other upstream 994612 2173988 ~ 2285052 (-)
G85232 LOC107663296,LOC107583514,LOC107733536 other upstream 1588532 2767908 ~ 2781353 (-)
LOC122355711 rara,LOC107700643,LOC107717720,LOC107565243,LOC107563215,LOC107719850,LOC108434941,LOC108261354,LOC107554136,LOC107737746,LOC108276117 other upstream 1910253 3089629 ~ 3103315 (-)
G85366 NA other upstream 2079155 3258531 ~ 3299688 (-)

Expression


Co-expression Network