G85165 (LOC107745672,LOC106958681,LOC103481982)



Basic Information


Item Value
gene id G85165
gene name LOC107745672,LOC106958681,LOC103481982
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 2573311 ~ 2576906 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU126176
GCTGTTTTTagttgataatattttattatgtgagAAGAGATTGTGGAGTGGTATTAGAGACACAGTGAAACTAGTACAGCCATTTCAGAAATCACTTTCCCGGTCAAAGGTCAATTTTACAGTTTACCATCgttatagaaaaatatatgacTGCAGAACGCTGCGCTTGATCAGTCACAGTGAAACATTTTAGAATTCTTGTATTGGAATGATAAAATCTTATATCCTTATATAACATAATGCATAAAGACcaatcaattttaaataatttggcTGTTGTCATTTTCTGAACTGAAATGGATTTTGTACTAACGAACATTACTAGAAATAACGCAAATGAATCGAACATGCACGGGAATATGACACGCCAAAACACTCGATTCGATTCTGCTTGGTAAACATCAAAACTAAACGATCCCTGCAAAACACTACGTAATCATATAGAGTTGATATATCCAACATGATTCTGAATAGCTTTATTGTAACGTAGGGTGCTAAAACATATTCTACAGTTTCTATACAAATATACAGCCCTACTCTCACAGGAATAACAAACGTACAGCACTGTACAGAActcctttaaaacaaatacagatatACAGATCAGCTCCGttctttacaaaataataaactagCTTTATATcgtcatgttttgtttgttttttttttgtgcaaaagtCTAAAGAACAGGCAGGTTCACATAGATTACAGCAGTTAACTAGGCTCCTAGCCACTTTGAGAAATGAAGAACCCAACCGCTCTCAGAAGACCCAGCTGACAGGAACCCATTGGTGGTCTGTGTTGAGTCTGTCCAGTGCCCTCCTGAGGCTGCGGTACGCTCCGTCCAGGTTGTCATTGACGATGCTCAGGTCAAAGTAGTGACTGTAGGCCCTCTGGATCCTTTCGCTCTCATCCACTGTCCGTTTGAGCTCTGAgtcctagagagagagagagagataaaaagcGATGGACTCCGGAATCTAGTCAACATTCGAGGAATCATTCTGAGGGCATCGAGAAAGAAATTACCGTCAACTGTTTCATCACAACACCAGCCTCGATGGCAGATCTGTTCATGTCTTTCAGAACTTCAAAGTTTGGGGCTTCAATGAACACCACATATGGAAGAAACTCTGCAGTTCGTAGAACTTTGAGTGCCTTTAAGAGAACAATGAGACGTGAAATGGGGTAATAATTGTATGGCAGCCCCAAtagacttttatttaaatataaataatctgCATCAGGTATTTAGCCTAGAACATTCATACAAAAAGTCTAATTTTGCAAATAGAGTGCAATATTTGGGTTCCAGAAATAGAATAAATGGGATgtggaaattttttaaatcgagatttttaaatcatctgaataagctgaataaataagctttccattcatgtatggtttgttaggataggccAATATTTAACAAAGATgcaatgattaatattttgggcctcatttataaaatgtcgCACAGAAAACATCCTAAATTTGATCTTACGATCGTCTctcaaatatatgcatgtttgaTTCATAGAATGAGCATACGAACAGAACACATGGGTAAGCCTCTCTTTCATTTGCGCACAAATgaatggtttcagctctctacctcctaattaatgtcattaaaatataaaatatcatcaatcatcataatttagcTGCAAGAACAactaacattttcaaaaaactgCAATActcatacaataaaaaatgcacacatCTTCTCAGAGCCTGACATGATCACGCTCTGCGctataaataagaatatattactaatcaaaaattacattttgatatatttacagtaggcaACTTGCAAATATCTTCATGGaccatgatctttacttaatatcctaatgatttttggcataaaataaaagtcaatatTTTGCCCCATACAATGTAtagttggctattgctacaaatatacccataaTAATAACTGGGGTAGTACAAATGGTtatacatttctccaaaatACCTAAGACAACTTGACGAATGCAGATATGCCATGTACAGTATAGTCGCAGTTGTGTTCATTGTCTTCATGTTTGAttagtttttctctctttgttgtACAGTTACAACAAAAGTTAGCAGAATCATAAGTTATATTACTTTTGTGAGCCATAGCTGGAGTTTCTGCACAAAGATTTCTTGCACCATGGATGAAACATACATTAATATGTTTACAGTGCTCCATAATTCTCAAAGCACCATATTCTGGGAAATAAAAttgggaaaaataataataaagtaacaaTGTTATGGCAGTTTTTCCATGTGATATCGAAAATGGTATTGAACATAATTTTTAAGGTATTAAGATTACACAAAATCTAGCACTTTTCTGCTTCAAATTAAAGTTAGCATCTGTTTGAATTCTGTGATTCACCTTGCcctttgggatttttttttttttaatatttcaggaaCCAGCAAAAGGGGACGCTAATGCACTCTTTAGGATATTGAAAATTTCAAAAGTGTACCTGCGGATTGACATCCAGAATGCAAACCTTGCCAGAGTCCACAACTTCATGAATGGAGTCGATCTTGGTGCCGTACAGGTTCCCGTCATATTCCCCGTGCTCAAGAAAACGGCCACATTTGATGTCAGTTTCCATCTCGCTGCGAGACATAAACAGGTACATCTGCCCCTCCTTCTCATCCACTTTTGGTTTACGAGATGTGTCTGTCAAGGTGTGGTGGTTCCATAACGGTGTGGGTCAGACAccaaaagtttgtttttcaagCTGCGGCGGCCCACACCCTGAGCTCCAATCAGAACCAGCGTCTTCCTGCGGAACGGAGGCACCTTGGCCACTTCCTCGTAGATCCTCAACTCATGTCGGTCAAACTCTGGTACGTTGAAAAGATCTCATCTATTGTTAGTCTGATTTAGCCACTTTATCGAATGTATCACTTGTCAGTTCCAGTTcagcttaaatataaatattgaggTTCCATTTActgtgtttctcattttctttggAAACTGAAATGGAACTGAGTACAAACTCATTATACAAACAGTGCCATTTTAGCTTGAAACAAACTGACTTCCGCAACAACAATCACAACAGAGAACAAGAGTACGACACGTGTGCATCCGTCGCACCGGACTTCGGCCATCTTTACCGGCGTTCTTGGTGGTCAAGTacatcatcttcttcttcttcttaccCCCAAT

Function


NR:

description
PREDICTED: MAGUK p55 subfamily member 2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU126176 True 3205 lncRNA 0.37 2 2573311 2576906
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Neighbor


gene id symbol gene type direction distance location
trnal-uag_3 NA coding downstream 79520 2493710 ~ 2493791 (-)
snu13b snu13b,nh2l1,snu13,LOC105898651,LOC105031476,LOC106589607,LOC105910236 coding downstream 96915 2474996 ~ 2476396 (-)
crym crym,LOC107745653,LOC107569187,LOC107753321,LOC107684776 coding downstream 99741 2470023 ~ 2473570 (-)
LOC122355817 LOC107695513,LOC107739060,LOC107653963,LOC107745680,LOC107593524,LOC101884976,LOC107579057 coding downstream 170626 2398531 ~ 2402685 (-)
adam8b LOC107654071,LOC107745666,LOC107739052,LOC107695548,LOC107596597,LOC107593516 coding downstream 180411 2381934 ~ 2392900 (-)
psmc5 psmc5,LOC107745657,LOC107753303,LOC107684752 coding upstream 4152 2581058 ~ 2585819 (-)
smarcd2 smarcd2,LOC107684754,LOC107569192,LOC107560559,LOC107694073,LOC107753305 coding upstream 10838 2587744 ~ 2596891 (-)
atxn7l3b si:dkeyp-118b1.2,LOC107694074,LOC107745658,LOC107684755,LOC105909120 coding upstream 20990 2597896 ~ 2603692 (-)
slc4a1b slc4a1b,LOC107569191,LOC107684772,LOC107753326,LOC108410807 coding upstream 28225 2605131 ~ 2616287 (-)
LOC122355185 bicc1,bicc1b,LOC107653928,LOC107596591,LOC107746462,LOC107727063,LOC107695510 coding upstream 127382 2704288 ~ 2708929 (-)
G85177 NA non-coding downstream 65350 2506178 ~ 2507961 (-)
G85174 NA non-coding downstream 87107 2485194 ~ 2486204 (-)
G85173 NA non-coding downstream 89384 2482247 ~ 2483927 (-)
G85119 NA non-coding downstream 261840 2311243 ~ 2311471 (-)
G85116 NA non-coding downstream 264278 2306892 ~ 2309033 (-)
G85214 NA non-coding upstream 101816 2678722 ~ 2679291 (-)
G85216 NA non-coding upstream 103138 2680044 ~ 2680317 (-)
G85235 NA non-coding upstream 215014 2791920 ~ 2792523 (-)
G85250 NA non-coding upstream 292234 2869140 ~ 2869689 (-)
G85257 NA non-coding upstream 342279 2919185 ~ 2947389 (-)
jmjd1cb jmjd1c,LOC107745648,LOC107654065,LOC107695544 other downstream 288259 2173988 ~ 2285052 (-)
ank3b ank3b,LOC107654059,LOC107695539 other downstream 625899 1814083 ~ 1947412 (-)
dlx4b dlx4b,LOC107739765,LOC107557342,LOC107708902 other downstream 1675794 889710 ~ 897517 (-)
ifnphi4 LOC107653919,LOC107732171,LOC107598640,LOC107664622,LOC107708945,LOC107557348 other downstream 2020868 543246 ~ 552443 (-)
zgc:163073 LOC107653918,LOC107732170,LOC107708955,LOC107557349,LOC107664608,LOC107598675 other downstream 2073092 496964 ~ 500219 (-)
G85232 LOC107663296,LOC107583514,LOC107733536 other upstream 191002 2767908 ~ 2781353 (-)
LOC122355711 rara,LOC107700643,LOC107717720,LOC107565243,LOC107563215,LOC107719850,LOC108434941,LOC108261354,LOC107554136,LOC107737746,LOC108276117 other upstream 512723 3089629 ~ 3103315 (-)
G85366 NA other upstream 681625 3258531 ~ 3299688 (-)
kcnh6b LOC107684759,LOC107753307,LOC107573422 other upstream 1640498 4217404 ~ 4230039 (-)
LOC122355775 NA other upstream 1720961 4297867 ~ 4305215 (-)

Expression


G85165(LOC107745672,LOC106958681,LOC103481982) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 12.
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G85165(LOC107745672,LOC106958681,LOC103481982) Expression in each Bioproject

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G85165(LOC107745672,LOC106958681,LOC103481982) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
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Co-expression Network