G85545


Basic Information

Item Value
gene id G85545
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4275337 ~ 4284935 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU126735
ACAAAATCATCTCACCGGACgcttcatacacacacaaaacacttctattattgctgtttgttgtgtttatttggaTAACAGGAATATCATCACAGATGATATTGATACGGGTTTGACGATGCATTTCCTTTGATTTTTGTCTGTACAAAATATTGTTTCTGACTAAAGATAGACATTCAGATTACACAGCATGTGTATGTGCTCCCTTTCAGTTTgttcaataatttaaaattcacATTCACAGATAAGATCAAGTATCCGTGTTAGACTTCCAGGGCAGCAAGTGTTACTGGGCTCTGCTCAGAAGTCAGGCCTGTCCTTCTTCAGTTTAGAGTAGTCCATGTTGACCGAGAAGAGCTGTGGGAAATAGGTTATGTATAggttaactacatgtacttactatatggttaagATCAGGGttaattgcatgtaattatgcataatttattgttttaatagtaACTAGTAACAAGCAgaccttaatataaagtgttaccagttaTTATAAGGCTTATAGactatattatgtaaacatatatGAAAAAACGAACACAGGAATGGCCGAAAGGTCTACGTGAATGTTGTTTTCACCTTGTACTGGTCATTTGGTCCCAGTTTGTTCCAAGGCTCTGGGTTGTTCTTGCGATCCCATCTGTTGACAGATTTCAGTCAGTAACGTGCTCCGAATTATTTTGGGACCTAAAGACTTTTGCCCGTTTGATAATGTGCACTACGAAATGGCCACTCACGAGCAGTCAGGGTTCTTCAGCGCAAGGCGGCCCAGGTAAAGCATAGACATGGTCGCTCCACCACCGATGAAGATAAAGAGAACTCACAGCCGGGTGGCTTTTCAGTTGTTTCAGCACGGTGCTCAGCATGTCAATCTCccgaaatatatatatgaagcagGATTAATGAGAGACCCGATGGTGTTCGTGCGCTCCGCTGTGTTTTTCTGAAGGGGAGTGTAAAGGGATGCCCGATACTAAT
>TU126737
tatttttttttttttttgttgctgtttgttgtgtttatttggaTAACAGGAATATCATCACAGATGATATTGATACGGGTTTGACGATGCATTTCCTTTGATTTTTGTCTGTACAAAATATTGTTTCTGACTAAAGATAGACATTCAGATTACACAGCATGTGTATGTGCTCCCTTTCAGTTTgttcaataatttaaaattcacATTCACAGATAAGATCAAGTATCCGTGTTAGACTTCCAGGGCAGCAAGTGTTACTGGGCTCTGCTCAGAAGTCAGGCCTGTCCTTCTTCAGTTTAGAGTAGTCCATGTTGACCGAGAAGAGCTGTGGGAAATAGGTTATGTATAggttaactacatgtacttactatatggttaagATCAGGGttaattgcatgtaattatgcataatttattgttttaatagtaACTAGTAACAAGCAgaccttaatataaagtgttaccagttaTTATAAGGCTTATAGactatattatgtaaacatatatGAAAAAACGAACACAGGAATGGCCGAAAGGTCTACGTGAATGTTGTTTTCACCTTGTACTGGTCATTTGGTCCCAGTTTGTTCCAAGGCTCTGGGTTGTTCTTGCGATCCCATCTGTTGACAGATTTCAGTCAGTAACGTGCTCCGAATTATTTTGGGACCTAAAGACTTTTGCCCGTTTGATAATGTGCACTACGAAATGGCCACTCACGAGCAGTCAGGGTTCTTCAGCGCAAGGCGGCCCAGGTAAAGCATAGACATGGTCGCTCCACCACCGATGAAGATAAAGAGAGGAATCAACTACGAAGAGACACAGAATCataaataatggcaaaatatAAGCAACCAATAACATCCCTATTACGCGGTCCATATAATAAGACCTAACAAATATAGTAATAGCTAATAGATCATAACATGTATTTGATTCAGTTAAATtgcattcaataaaaatgatacaatCATGTTTGCAAATATCAACATTCAGTTCTCTTCCACTTTGAACATCAAATTAAACTGTAAAGCACTGTCAACACTGTTGATTTAACTtgagacacacatacatacacaaacgcAAATTAATTCTTGCGTGCGTATATTAAATTGTGACTTTATTAAACCGGAAAAGGTACGTTTCCAATGTTGActatgtaggcagctcactaggtttcgAGACAGCGCCATACATCTCTGAGGAAATTAGAATAacgttgtttttttattgctatatttttataaatatatcatctACAAGCGTAAAGCAAATTTCTTTGATATTTACCGTTTATTACAAATCCTGCTGTAGTTATTGCAAATGCTACAGCTGCGTGTTAGCTACTGTACAGTAACGTTAAATGCCGTCCGATTTACctcagggcttttttttttaaatacatgcatggcCAGTTCCTTCACATAACCTATACGGTctataatatttaagtattacaAGTCTTTATTGAAATCAGTCAtggtaaatgatttaaaataggCTTTCACCTCAATGTCCTTGACAGCTGCTGAACACTACAACACAGCCATTTATGACAGATAAACGCGACCTACAGCCGGCATACGTGCTCAGCCACTGCTGTAATATGGTGAAATCACGTACACAGCGTACAGACTGAAATATGCTCACTATATCACAAAATATAGAATAACACGAAATCCATATTCACCCCCCGCTGGGGCCATTCAATATACTGTTTATACTGTACACGTTTGCATTGAATGCAAGGTTAACGTTACCCCTCGAGCAGCGAACGAGGATGTATGACACACACCGAAACGATTCTGACGCATGACTTtgagaatgaatgaatcattaacGGACCGAAGCATTAGCGTTAAGAGATGCGAAATACTCACAGCCGGGTGGCTTTTCAGTTGTTTCAGCACGGTGCTCAGCATGTCAATCTCccgaaatatatatatgaagcagGATTAATGAGAGACCCGATGGTGTTCGTGCGCTCCGCTGTGTTTTTCTGAAGGGGAGTGTAAAGGGATGCCCGATACTAAT

Function

NR:

description
PREDICTED: Krueppel-like factor 13

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126735 False 990 lncRNA 0.40 2 4275337 4277399
TU126737 True 2031 lncRNA 0.38 2 4275337 4284935

Neighbor

gene id symbol gene type direction distance location
LOC122355129 LOC107560557,LOC107753319,LOC107735415,LOC107694068 coding downstream 38108 4232549 ~ 4237229 (-)
dnajc9 dnajc9,LOC107694081,LOC107684784,LOC107751706,LOC107753312 coding downstream 104415 4167639 ~ 4170922 (-)
p4ha1a p4ha1a,LOC107684765,LOC107753313,LOC107751705,LOC107560551 coding downstream 121462 4139060 ~ 4153875 (-)
ppp1r9bb ppp1r9bb,LOC107741705,LOC107684769,LOC107675672,LOC107713069,LOC107598037,LOC107576248 coding downstream 168093 4088710 ~ 4107244 (-)
trnal-uag_48 NA coding downstream 195155 4080101 ~ 4080182 (-)
LOC122355389 grid1b,grid1,LOC106578986,LOC106589364 coding upstream 644878 4929813 ~ 5055115 (-)
ccser2b LOC107716476,LOC107653247,LOC107727960,LOC107569472,LOC107674460 coding upstream 995446 5280381 ~ 5330233 (-)
pelo pelo,LOC107653258,LOC107674509 coding upstream 1075429 5360364 ~ 5367143 (-)
emc9 emc9,LOC107716469,LOC107551848,LOC107674563,LOC107727956,LOC107653261 coding upstream 1130964 5415899 ~ 5419866 (-)
ghdc ghdc,LOC107556765,LOC107727961,LOC107716443,LOC107577004 coding upstream 1192587 5477522 ~ 5486280 (-)
G85541 NA non-coding downstream 5721 4268003 ~ 4269616 (-)
G85515 NA non-coding downstream 87000 4183582 ~ 4188337 (-)
G85511 NA non-coding downstream 99071 4175990 ~ 4176266 (-)
G85487 NA non-coding downstream 100114 4117805 ~ 4175223 (-)
G85435 NA non-coding downstream 313984 3960763 ~ 3961353 (-)
G85551 NA non-coding upstream 26518 4311453 ~ 4311904 (-)
G85553 NA non-coding upstream 27644 4312579 ~ 4313048 (-)
G85569 NA non-coding upstream 126405 4411340 ~ 4412200 (-)
G85572 NA non-coding upstream 167820 4452755 ~ 4453276 (-)
G85868 NA non-coding upstream 1442369 5727304 ~ 5731090 (-)
kcnh6b LOC107684759,LOC107753307,LOC107573422 other downstream 45298 4217404 ~ 4230039 (-)
G85366 NA other downstream 975649 3258531 ~ 3299688 (-)
LOC122355711 rara,LOC107700643,LOC107717720,LOC107565243,LOC107563215,LOC107719850,LOC108434941,LOC108261354,LOC107554136,LOC107737746,LOC108276117 other downstream 1172022 3089629 ~ 3103315 (-)
G85232 LOC107663296,LOC107583514,LOC107733536 other downstream 1493984 2767908 ~ 2781353 (-)
jmjd1cb jmjd1c,LOC107745648,LOC107654065,LOC107695544 other downstream 1990285 2173988 ~ 2285052 (-)
LOC122355775 NA other upstream 12932 4297867 ~ 4305215 (-)
trnal-uag_49 NA other upstream 60450 4345385 ~ 4345467 (-)
trnal-uag_50 NA other upstream 62763 4347698 ~ 4347779 (-)
trnal-aag_58 NA other upstream 62927 4347862 ~ 4347942 (-)
trnal-uag_51 NA other upstream 63930 4348865 ~ 4348946 (-)

Expression


Co-expression Network