G85774


Basic Information

Item Value
gene id G85774
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 5821431 ~ 5821687 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU127011
CCCAACTTCATAAGTTTGTGCCCCTAATTCATTTTGGTCTATTTGCCTATAAAAAAGCTTAAAGACATTATTAACAGTTTTAACCATATGTGATATTAATAGGTGTTAccaatttgtttttcaaaaagtcaaaacaacagcaaaatgCACGCATGTTCATAAGATATATTTTGGAATATCTGTCTTTTATTGGTTATTTGGGGAATGATTAAAAATAGTGACATTCTCAATAATAAGACTATGACCTCTAACAATGG

Function

GO: NA

KEGG:

id description
ko04510 Focal adhesion

RNA

RNA id representative length rna type GC content exon number start site end site
TU127011 True 257 lncRNA 0.30 1 5821431 5821687

Neighbor

gene id symbol gene type direction distance location
LOC122355830 tceb2,LOC108280902,LOC107564001,LOC103036770,LOC108427344 coding upstream 55588 5762494 ~ 5765843 (+)
kbtbd2 kbtbd2,LOC107711671,LOC107674719,LOC107660299,LOC107708283,LOC107551836 coding upstream 121525 5691358 ~ 5699906 (+)
si:ch211-217a12.1 si:ch211-217a12.1,LOC107674759,LOC108431403,LOC106590406 coding upstream 137103 5668900 ~ 5684328 (+)
fkbp10b fkbp9,fkbp10b,LOC107674681 coding upstream 200091 5614079 ~ 5621340 (+)
ppp1r16a ppp1r16a,LOC107716460,LOC107653270,LOC107674642,LOC107727964,LOC107551825 coding upstream 256677 5543755 ~ 5564754 (+)
med1 med1 coding downstream 18516 5840203 ~ 5863290 (+)
LOC122355059 adprh,LOC108411014,LOC108274007,LOC105894051 coding downstream 502806 6324493 ~ 6391831 (+)
LOC122355310 LOC107569775 coding downstream 759901 6581588 ~ 6583943 (+)
plxdc1 plxdc1,LOC107732187,LOC107566549,LOC107694606 coding downstream 978098 6799785 ~ 6961984 (+)
plcd3b plcd3b,LOC107751666,LOC107561636,LOC107662566 coding downstream 1361743 7183430 ~ 7219444 (+)
G85713 NA non-coding upstream 219250 5601474 ~ 5602181 (+)
G85687 stat5b,LOC107674616,LOC107556764,LOC107727963,LOC102309899 non-coding upstream 325197 5495107 ~ 5496234 (+)
G85685 NA non-coding upstream 328497 5491714 ~ 5492934 (+)
G85683 ghdc,LOC107556765,LOC107727961 non-coding upstream 335682 5483574 ~ 5485749 (+)
G85661 NA non-coding upstream 418719 5397563 ~ 5402712 (+)
G85905 NA non-coding downstream 136207 5957894 ~ 5958234 (+)
G85967 NA non-coding downstream 276441 6098128 ~ 6098334 (+)
G85971 NA non-coding downstream 279475 6101162 ~ 6118513 (+)
LOC122355060 NA non-coding downstream 508650 6330337 ~ 6336029 (+)
G86033 NA non-coding downstream 702273 6523960 ~ 6524390 (+)
LOC122355829 tgfb1i1 other upstream 5116 5766397 ~ 5816315 (+)
drosha drosha,rnasen,LOC107716466,LOC107727962,LOC107556767 other upstream 374712 5426581 ~ 5446719 (+)
LOC122355392 pnmt,LOC107571312,LOC107676565 other upstream 712385 5081165 ~ 5109046 (+)
G85587 NA other upstream 731793 5088925 ~ 5089638 (+)
G85567 NA other upstream 1368156 4452855 ~ 4453275 (+)
becn1 becn1,atg6 other downstream 65265 5886952 ~ 5953486 (+)
G85962 NA other downstream 274261 6095948 ~ 6096732 (+)
G85986 adprh,LOC108411014,LOC107726130,LOC105894051,LOC108274007 other downstream 393232 6214919 ~ 6216567 (+)
G86019 LOC107570179 other downstream 619134 6440821 ~ 6441526 (+)
G86029 NA other downstream 700142 6521829 ~ 6522571 (+)

Expression


Co-expression Network