G85905


Basic Information

Item Value
gene id G85905
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 5957894 ~ 5958234 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU127179
ctcttttttattacattttcattgcattatCATTTATCTTTCTGAATTTCATCTTTAGGAGCTTTTGGTGTAAAGTAAATTAATGACAgatgtatttgaaaaaataattaattgcacaaATTGTACATAAGATctataaactgcattttaatgcattctatTTTCAGTGCTTGCATTTTCGGGTTTGAAATTCAATGTggctgtttatttaaagggttcatatgatgcaatttcagtttttcttttctctttagaGAGAGACCtcttataatcaaataaatgttacattttttaaaaattaaaatgaatacattttagactTAAGGATCTGTGGGAACcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127179 True 341 lncRNA 0.27 1 5957894 5958234

Neighbor

gene id symbol gene type direction distance location
med1 med1 coding upstream 94604 5840203 ~ 5863290 (+)
LOC122355830 tceb2,LOC108280902,LOC107564001,LOC103036770,LOC108427344 coding upstream 192051 5762494 ~ 5765843 (+)
kbtbd2 kbtbd2,LOC107711671,LOC107674719,LOC107660299,LOC107708283,LOC107551836 coding upstream 257988 5691358 ~ 5699906 (+)
si:ch211-217a12.1 si:ch211-217a12.1,LOC107674759,LOC108431403,LOC106590406 coding upstream 273566 5668900 ~ 5684328 (+)
fkbp10b fkbp9,fkbp10b,LOC107674681 coding upstream 336554 5614079 ~ 5621340 (+)
LOC122355059 adprh,LOC108411014,LOC108274007,LOC105894051 coding downstream 366259 6324493 ~ 6391831 (+)
LOC122355310 LOC107569775 coding downstream 623354 6581588 ~ 6583943 (+)
plxdc1 plxdc1,LOC107732187,LOC107566549,LOC107694606 coding downstream 841551 6799785 ~ 6961984 (+)
plcd3b plcd3b,LOC107751666,LOC107561636,LOC107662566 coding downstream 1225196 7183430 ~ 7219444 (+)
nmt1b LOC107561637,LOC107662571,LOC107758416 coding downstream 1267628 7225862 ~ 7233649 (+)
G85774 NA non-coding upstream 136207 5821431 ~ 5821687 (+)
G85713 NA non-coding upstream 355713 5601474 ~ 5602181 (+)
G85687 stat5b,LOC107674616,LOC107556764,LOC107727963,LOC102309899 non-coding upstream 461660 5495107 ~ 5496234 (+)
G85685 NA non-coding upstream 464960 5491714 ~ 5492934 (+)
G85683 ghdc,LOC107556765,LOC107727961 non-coding upstream 472145 5483574 ~ 5485749 (+)
G85967 NA non-coding downstream 139894 6098128 ~ 6098334 (+)
G85971 NA non-coding downstream 142928 6101162 ~ 6118513 (+)
LOC122355060 NA non-coding downstream 372103 6330337 ~ 6336029 (+)
G86033 NA non-coding downstream 565726 6523960 ~ 6524390 (+)
G86037 NA non-coding downstream 610989 6569223 ~ 6569454 (+)
becn1 becn1,atg6 other upstream 4408 5886952 ~ 5953486 (+)
LOC122355829 tgfb1i1 other upstream 141579 5766397 ~ 5816315 (+)
drosha drosha,rnasen,LOC107716466,LOC107727962,LOC107556767 other upstream 511175 5426581 ~ 5446719 (+)
LOC122355392 pnmt,LOC107571312,LOC107676565 other upstream 848848 5081165 ~ 5109046 (+)
G85587 NA other upstream 868256 5088925 ~ 5089638 (+)
G85962 NA other downstream 137714 6095948 ~ 6096732 (+)
G85986 adprh,LOC108411014,LOC107726130,LOC105894051,LOC108274007 other downstream 256685 6214919 ~ 6216567 (+)
G86019 LOC107570179 other downstream 482587 6440821 ~ 6441526 (+)
G86029 NA other downstream 563595 6521829 ~ 6522571 (+)
G86142 NA other downstream 1344904 7303138 ~ 7304848 (+)

Expression


Co-expression Network