G86019 (LOC107570179)


Basic Information

Item Value
gene id G86019
gene name LOC107570179
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 6440821 ~ 6441526 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU127334
gttcatattgtagaacatttattcccaactaTGCCATTGAAGAGTCACCTTTGAGCGCTTTGGCTCACGGAAAAAGGTTGCAGCCACATGACAAACTGACCTGGActcctgaagcagagaaagcatttgaaaggttgaaaatgttgttacagacatccccaagtctgggacttccagaccctgagagaaatttgtacaaacagttgatgagaaaaatggtttcatgtcttctgttctgttacaggatCACGGGGGAAAGCTGAGACCGGtggcatatttttcaagtaaactcgaccctgtggcagcaggtctaccaaattgtctgagagctgtagcagcagcagaaaaagctattttagcttcaagggaaattgtgggatattctgatgtaacattactagtgccacacgctgtctctatgatcctgttggaacagaaaacatctcatttgtcaacagccagatggctcagatataataccattctattggaaatgccaaacatcacagtaaaacggtgtacagtattgaatcctgccacactgctcccgaccgagcaggatggcgaggaacataattgtatcgccgcattggaacaggtgtgcacaccgcgaccagatttaaaagaaaccccccttgacaatgcagatttggttttgtttgttgatggttCAGCGTCTCGAGACCCAGAAACCGGTAAAAACAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127334 True 706 TUCP 0.44 1 6440821 6441526

Neighbor

gene id symbol gene type direction distance location
LOC122355059 adprh,LOC108411014,LOC108274007,LOC105894051 coding upstream 48990 6324493 ~ 6391831 (+)
med1 med1 coding upstream 577531 5840203 ~ 5863290 (+)
LOC122355830 tceb2,LOC108280902,LOC107564001,LOC103036770,LOC108427344 coding upstream 674978 5762494 ~ 5765843 (+)
kbtbd2 kbtbd2,LOC107711671,LOC107674719,LOC107660299,LOC107708283,LOC107551836 coding upstream 740915 5691358 ~ 5699906 (+)
si:ch211-217a12.1 si:ch211-217a12.1,LOC107674759,LOC108431403,LOC106590406 coding upstream 756493 5668900 ~ 5684328 (+)
LOC122355310 LOC107569775 coding downstream 140062 6581588 ~ 6583943 (+)
plxdc1 plxdc1,LOC107732187,LOC107566549,LOC107694606 coding downstream 358259 6799785 ~ 6961984 (+)
plcd3b plcd3b,LOC107751666,LOC107561636,LOC107662566 coding downstream 741904 7183430 ~ 7219444 (+)
nmt1b LOC107561637,LOC107662571,LOC107758416 coding downstream 784336 7225862 ~ 7233649 (+)
svild LOC107758427,LOC107675649,LOC107561632 coding downstream 792412 7233938 ~ 7292140 (+)
LOC122355060 NA non-coding upstream 104792 6330337 ~ 6336029 (+)
G85971 NA non-coding upstream 322308 6101162 ~ 6118513 (+)
G85967 NA non-coding upstream 342487 6098128 ~ 6098334 (+)
G85905 NA non-coding upstream 482587 5957894 ~ 5958234 (+)
G85774 NA non-coding upstream 619134 5821431 ~ 5821687 (+)
G86033 NA non-coding downstream 82434 6523960 ~ 6524390 (+)
G86037 NA non-coding downstream 127697 6569223 ~ 6569454 (+)
G86038 NA non-coding downstream 128187 6569713 ~ 6569968 (+)
G86043 NA non-coding downstream 132388 6573914 ~ 6574126 (+)
G86045 LOC101886504,LOC101886427 non-coding downstream 227398 6668924 ~ 6669449 (+)
G85986 adprh,LOC108411014,LOC107726130,LOC105894051,LOC108274007 other upstream 224254 6214919 ~ 6216567 (+)
G85962 NA other upstream 344089 6095948 ~ 6096732 (+)
becn1 becn1,atg6 other upstream 487335 5886952 ~ 5953486 (+)
LOC122355829 tgfb1i1 other upstream 624506 5766397 ~ 5816315 (+)
drosha drosha,rnasen,LOC107716466,LOC107727962,LOC107556767 other upstream 994102 5426581 ~ 5446719 (+)
G86029 NA other downstream 80303 6521829 ~ 6522571 (+)
G86142 NA other downstream 861612 7303138 ~ 7304848 (+)
G86143 NA other downstream 866398 7307924 ~ 7308229 (+)
LOC122355675 NA other downstream 1374297 7815823 ~ 7844083 (+)
msrb1b msrb1b,LOC100705913 other downstream 1663622 8105148 ~ 8106780 (+)

Expression


Co-expression Network