G86030


Basic Information

Item Value
gene id G86030
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 6521826 ~ 6522579 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU127345
ccaacagtctctgatactgcttgacagtgaatgactggccttccctgactctctcgactgacatgaggattgactgcacacgggcaggagacaagcgtgcccacattgtggtcgaatcccacaccacgcctaggtatgtggtcctctgagcgggacgcaatacactcttcttggcgttcagtctcaaacccagctcccccatgtgagacagaacaacatctcgatgttgaactgccatctgctctgattgagctaatatcaaccaatcgtcgatataattgagtatgcggatgccctggagtctcagtggagccagagctgcatccatacacttcgtaaatgtgcggggtgagagtgctaggccgaacggaagtactcgatattggtatgctacgcccccgaaagcgaacctcagaaacttcctgtgttgaggaaggatggatatatggaagtatgcgtctttcagatctatgttgacaaaccagtcctcggatctgatttgagtcaccacatgcttgatggtaagcattttgaacttcagtctgctgactgagcggttcaagaccctcagatctaggataggacgcaaccccccgtccttctttggaacaatgaagtagcggctgtaaaacccagattccacagcatgaggagggaccacctcgatggcctccttcctgagcagggatcttacttcctgttccatcaccagagcctgctgggggccgactactgtcggtgtgactcccctgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127345 True 754 lncRNA 0.51 1 6521826 6522579

Neighbor

gene id symbol gene type direction distance location
LOC122355417 adprh,LOC108411014,LOC108274007,LOC105894051,LOC107726130,LOC106579059,LOC107571852 coding downstream 241478 6197482 ~ 6280348 (-)
neurod2 LOC107571318,LOC107676581,LOC107732719,LOC107701796,LOC107568320 coding downstream 499670 6017991 ~ 6022156 (-)
mylpfb mylpfb,LOC107571443,LOC107674915,LOC108443170,LOC102793118,LOC101482131,LOC108274226,LOC102196412 coding downstream 643605 5875085 ~ 5878221 (-)
pkmyt1 pkmyt1 coding downstream 759215 5748277 ~ 5762611 (-)
sult1st6 sult1st6,LOC107674799,LOC107708285,LOC107574469 coding downstream 775296 5736592 ~ 5746530 (-)
hexim1 hexim1,LOC107733802,LOC107661096,LOC107662567,LOC107561639,LOC107751667,LOC107576140 coding upstream 648817 7171396 ~ 7173368 (-)
acbd4 LOC107661095,LOC107733800,LOC107662569 coding upstream 652039 7174618 ~ 7182834 (-)
kcnj19b si:dkey-100n10.2,LOC107584158,LOC107758432,LOC107661094,LOC108424892,LOC107727700,LOC108273498 coding upstream 836804 7359383 ~ 7365015 (-)
hectd2 hectd2,LOC107584154,LOC107758436,LOC107594154,LOC107753452 coding upstream 982137 7504716 ~ 7521406 (-)
pcgf5b pcgf5b,LOC107584148,LOC107594155,LOC107669177,LOC107753439,LOC107758437,LOC107704022,LOC108410714 coding upstream 1004497 7527076 ~ 7538565 (-)
G86026 NA non-coding downstream 78129 6443328 ~ 6443697 (-)
G86024 NA non-coding downstream 78753 6442818 ~ 6443073 (-)
G86020 LOC107570179 non-coding downstream 80305 6440817 ~ 6441521 (-)
G86017 NA non-coding downstream 82492 6438900 ~ 6439334 (-)
G85966 NA non-coding downstream 423959 6097060 ~ 6097867 (-)
G86032 NA non-coding upstream 334 6522913 ~ 6523657 (-)
G86048 LOC101886504,LOC101886427 non-coding upstream 146348 6668927 ~ 6669464 (-)
G86091 NA non-coding upstream 442511 6965090 ~ 6965411 (-)
LOC122355669 LOC107741973,LOC107661982,LOC107569001 non-coding upstream 478427 7001006 ~ 7002149 (-)
G86094 LOC107569001,LOC107741973 non-coding upstream 479681 7002260 ~ 7002931 (-)
LOC122355418 pnmt,LOC107571312,LOC107676565 other downstream 443758 6051168 ~ 6078068 (-)
G85930 LOC107711793,LOC107755027 other downstream 509715 5990913 ~ 6012111 (-)
G85925 NA other downstream 534046 5984989 ~ 5987780 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other downstream 1095315 5423084 ~ 5426511 (-)
G85779 atp2a1l,LOC107551849,LOC107716472,LOC107653256,LOC108274121,LOC107094295 other downstream 1124914 5322478 ~ 5396912 (-)
G86049 LOC101886504,LOC101886427 other upstream 147740 6670319 ~ 6671247 (-)
G86108 NA other upstream 581301 7103880 ~ 7104218 (-)
G86203 NA other upstream 865657 7388236 ~ 7388910 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other upstream 1811825 8334404 ~ 8359992 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other upstream 1988824 8511403 ~ 8513265 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G331277 NA non-coding NC_047616.1 CM018562.1 12732809 ~ 12733703 (+)