G86043


Basic Information

Item Value
gene id G86043
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 6573914 ~ 6574126 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU127360
AAGTCGGCCggtatcaaaacctttggctgctgaagaaatcaactaatccCTTACTCCCAGCTATAGCGCCCCCAATGGGAGCATGTGAGGGCTGGAGAGTTGCTCTAaacctgactgcagcagtgacGGTCACACTGGTGGCCATGGAGAGAGACAGCATAACAACTCAAGGACTGTTATCATGGTTGTTCGGTGGGGAATGGTGGAATGTGC

Function

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0015629 actin cytoskeleton cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG:

id description
ko00710 Carbon fixation in photosynthetic organisms

RNA

RNA id representative length rna type GC content exon number start site end site
TU127360 True 213 lncRNA 0.52 1 6573914 6574126

Neighbor

gene id symbol gene type direction distance location
LOC122355059 adprh,LOC108411014,LOC108274007,LOC105894051 coding upstream 182083 6324493 ~ 6391831 (+)
med1 med1 coding upstream 710624 5840203 ~ 5863290 (+)
LOC122355830 tceb2,LOC108280902,LOC107564001,LOC103036770,LOC108427344 coding upstream 808071 5762494 ~ 5765843 (+)
kbtbd2 kbtbd2,LOC107711671,LOC107674719,LOC107660299,LOC107708283,LOC107551836 coding upstream 874008 5691358 ~ 5699906 (+)
si:ch211-217a12.1 si:ch211-217a12.1,LOC107674759,LOC108431403,LOC106590406 coding upstream 889586 5668900 ~ 5684328 (+)
LOC122355310 LOC107569775 coding downstream 7462 6581588 ~ 6583943 (+)
plxdc1 plxdc1,LOC107732187,LOC107566549,LOC107694606 coding downstream 225659 6799785 ~ 6961984 (+)
plcd3b plcd3b,LOC107751666,LOC107561636,LOC107662566 coding downstream 609304 7183430 ~ 7219444 (+)
nmt1b LOC107561637,LOC107662571,LOC107758416 coding downstream 651736 7225862 ~ 7233649 (+)
svild LOC107758427,LOC107675649,LOC107561632 coding downstream 659812 7233938 ~ 7292140 (+)
G86038 NA non-coding upstream 3946 6569713 ~ 6569968 (+)
G86037 NA non-coding upstream 4460 6569223 ~ 6569454 (+)
G86033 NA non-coding upstream 49524 6523960 ~ 6524390 (+)
LOC122355060 NA non-coding upstream 237885 6330337 ~ 6336029 (+)
G85971 NA non-coding upstream 455401 6101162 ~ 6118513 (+)
G86045 LOC101886504,LOC101886427 non-coding downstream 94798 6668924 ~ 6669449 (+)
G86046 LOC101886504,LOC101886427 non-coding downstream 96188 6670314 ~ 6671334 (+)
G86047 NA non-coding downstream 99214 6673340 ~ 6674070 (+)
G86095 NA non-coding downstream 433701 7007827 ~ 7009178 (+)
G86097 NA non-coding downstream 437062 7011188 ~ 7011412 (+)
G86029 NA other upstream 51343 6521829 ~ 6522571 (+)
G86019 LOC107570179 other upstream 132388 6440821 ~ 6441526 (+)
G85986 adprh,LOC108411014,LOC107726130,LOC105894051,LOC108274007 other upstream 357347 6214919 ~ 6216567 (+)
G85962 NA other upstream 477182 6095948 ~ 6096732 (+)
becn1 becn1,atg6 other upstream 620428 5886952 ~ 5953486 (+)
G86142 NA other downstream 729012 7303138 ~ 7304848 (+)
G86143 NA other downstream 733798 7307924 ~ 7308229 (+)
LOC122355675 NA other downstream 1241697 7815823 ~ 7844083 (+)
msrb1b msrb1b,LOC100705913 other downstream 1531022 8105148 ~ 8106780 (+)
hbbe2 hbbe2,LOC107734191,LOC105910203 other downstream 1621838 8195964 ~ 8197904 (+)

Expression


Co-expression Network