G1645


Basic Information

Item Value
gene id G1645
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 2828371 ~ 2828613 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU1850
TCCTAAGTATTCAGACCCTTTGCTGTGACACTCATATATTTAACTCAGGTGCTGTCCATTTCTTCTGATCATCCTTGAGATGGTTCTACACCTTCATTTGAGTCCAGCTGTGTTTGATTATACTGATTGGTCTTGATTAGGAAAGCCACAGACCTGTCTATACAAGACCTTACAGCTCACAGTGCATGTCAGAGCAAATGAGAATCATGAGGTCAAAGGAACTGCCTGAAGAGCTCAGAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1850 True 243 lncRNA 0.41 1 2828371 2828613

Neighbor

gene id symbol gene type direction distance location
CI01000000_02660983_02661759 NA coding upstream 166500 2660983 ~ 2661871 (+)
CI01000000_02652927_02658258 NA coding upstream 170077 2652927 ~ 2658294 (+)
CI01000000_02639274_02651177 DDX41 coding upstream 176809 2639274 ~ 2651578 (+)
CI01000000_02622249_02636433 FAM193B coding upstream 191889 2621937 ~ 2636482 (+)
CI01000000_02608926_02617589 ABHD18 coding upstream 210406 2608926 ~ 2617965 (+)
CI01000000_03011002_03017021 NA coding downstream 182041 3010654 ~ 3017031 (+)
CI01000000_03044838_03057977 NA coding downstream 215899 3044512 ~ 3058570 (+)
CI01000000_03073311_03109669 UNC5A coding downstream 243677 3072290 ~ 3109818 (+)
CI01000000_03163645_03170599 CLTB coding downstream 334544 3163157 ~ 3171011 (+)
CI01000000_03178021_03180730 NA coding downstream 349408 3178021 ~ 3180812 (+)
G1617 NA non-coding upstream 65813 2762341 ~ 2762558 (+)
G1604 NA non-coding upstream 128475 2699674 ~ 2699896 (+)
G1509 NA non-coding upstream 232926 2591137 ~ 2595445 (+)
CI01000000_02334112_02352906 NA non-coding upstream 475002 2333555 ~ 2353369 (+)
G1661 NA non-coding downstream 49978 2878591 ~ 2878870 (+)
G1523 NA non-coding downstream 95075 2923688 ~ 2939028 (+)
G1515 NA non-coding downstream 295885 3124498 ~ 3149400 (+)
G1682 NA non-coding downstream 382217 3210830 ~ 3211436 (+)
G1683 NA non-coding downstream 383210 3211823 ~ 3212955 (+)
G579 NA other upstream 919563 1767917 ~ 1908808 (+)
G435 NA other upstream 1395517 1425121 ~ 1432854 (+)
G350 NA other upstream 2151434 671842 ~ 676937 (+)
G252 NA other upstream 2321299 503209 ~ 507072 (+)
G2774 NA other downstream 1625165 4453778 ~ 4454232 (+)
G2850 NA other downstream 1897373 4725986 ~ 4726482 (+)
G6811 NA other downstream 7376218 10204831 ~ 10321679 (+)
G6820 NA other downstream 7598610 10427223 ~ 10433018 (+)
G7018 NA other downstream 8149876 10978489 ~ 10980872 (+)

Expression


Co-expression Network