G86110 (hexim1,LOC107733802,LOC107661096,LOC107662567,LOC107561639,LOC107751667,LOC107576140)


Basic Information

Item Value
gene id G86110
gene name hexim1,LOC107733802,LOC107661096,LOC107662567,LOC107561639,LOC107751667,LOC107576140
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7129610 ~ 7173329 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU127443
TAAGGTTTggatatttataatttaaacacTGACAAAATATAGCAGGCaacataaaaagacaaataaaattacaactaaaatacaaaataatttaatatatttgggCAAAACACCATAAACGGTTTCCCACGGTTTACAACATACGGTCTTACCATGCATCAACACACATAAAGCATGTGCGCCAACAAATAGGAATCTGAAGcgctaaatgttttgtttttaaattaaatgcaagttaaatatttaagtactaTGGCAATTGACAACTGAAATTTAATTTGTGAGGTTATGGCATATACTCAGAAAATTAACAAGAGTAGTCTCTGatctttctttaattttataCATAACATTGTaggttattcattttttcagagTTCAATTGTACAAATCACAAACGTATATTGTTGTGGCTTGACCAAATATGTGGGAGCGCatgaaagatttaaataaaattctgtcctaagagagaaaaaaaaaaaaacaacattataaaaaccataaaaaatatataaccttCAAACGGCAAAGGCTGAGAGGGTATTGGCTACCAAAGAgatgtttacatttgtttacagTAAGACAGTGCAACGATGTGACGTACAACAGgaataaaacactgattcaaCACGACTGAGACTGATCGAGTCCTGGACCTTTGCTTTTAGGGGTTTTGAGTAATAACTCGTTGTTCTCGGCTCTCAGTCTCTCCACCTCAATCTCCAGCTCCCGCACGCGCTGAACGCCGGTGCCGTCTGCCGGGGACTCGGGGTTTCTACGGAGGTGGCGAAGCCAGTTGTTCTCTTCCTCTAACCGTGACATACATTTCTCGAGCTCCAGGTATTCCCTAACCAGTTCTTGTTTAGACATATTTTGGAGAGTCTCGACGTGGTACCGCTCATAGGTCTCAGAAAAGTCTCTCTGCAAAAACTCTCCGCCTGCGTGCCCGGGTCTGCCCATACCGTCGCTGCCTCCGCCACCGCCGCCCTCTTCCTCGTCTTCATCTTCTCCTTCGAAATTCTCATCTTCGCTAGCTGTGTCATCGGAGCGAATCGCCCCAGACTTTCTGCCGCCTAGCTCCGTGTTGAGGTCAGGTTCTTCGCGGTCGTGCTCCTCCATCAGAAATTGGGTGGTGTTGTATGGGGCAACGGGCAGACCTTTCGCGAACATCTCAGCGCGCACCCGAGATGCACGGGCGGTCTCACGTTCATCTAGCTCTTTCTTCTCCTCCCAGGTTAATTTGAAGTAAGGTTTCCAGCGGCGCTTCTTCTTGGAAGGTCGTCGCCGGTGTTTTTTCTTGCCCTGCCGGCCATCTGACAGCCCCTCGGTGTTTACTGTCGTGCAATCACTGTCTCTCTTTTTATCCACAGGAAAGCCGTCGTCACTTGCTGCGTCACCAGCCTTGGGCTCCGGATCACTCCTATCCCGGCCGCGGCACATAGGATGTGTATCTCCAGACACCAAACCCGGACAGATCTCCAGCTGGTTTCTTTGCACTTGTTTCGAGGAGACGACACTTGTCAGACCATCCCTCTGCCGCCCTCTGCTGTCATCCTCCAGTGCAGCTTCTTCTTTATTAAGCTCCATAACTGTACACTCCCACCTCACCGTTCAACTCCAATCTCGTGTTTGAGTTATTATGCTATCTGAgaatgttaatataaattagTTCTGTTCCGTCTACTATTGACTTGTTTTCTTGACGAGTACGACAACATTTCCCTTCC
>TU127446
aatatataaataaaaaaaaaaaaacaacattataaaaaccataaaaaatatataaccttCAAACGGCAAAGGCTGAGAGGGTATTGGCTACCAAAGAgatgtttacatttgtttacagTAAGACAGTGCAACGATGTGACGTACAACAGgaataaaacactgattcaaCACGACTGAGACTGATCGAGTCCTGGACCTTTGCTTTTAGGGGTTTTGAGTAATAACTCGTTGTTCTCGGCTCTCAGTCTCTCCACCTCAATCTCCAGCTCCCGCACGCGCTGAACGCCGGTGCCGTCTGCCGGGGACTCGGGGTTTCTACGGAGGTGGCGAAGCCAGTTGTTCTCTTCCTCTAACCGTGACATACATTTCTCGAGCTCCAGGTATTCCCTAACCAGTTCTTGTTTAGACATATTTTGGAGAGTCTCGACGTGGTACCGCTCATAGGTCTCAGAAAAGTCTCTCTGCAAAAACTCTCCGCCTGCGTGCCCGGGTCTGCCCATACCGTCGCTGCCTCCGCCACCGCCGCCCTCTTCCTCGTCTTCATCTTCTCCTTCGAAATTCTCATCTTCGCTAGCTGTGTCATCGGAGCGAATCGCCCCAGACTTTCTGCCGCCTAGCTCCGTGTTGAGGTCAGGTTCTTCGCGGTCGTGCTCCTCCATCAGAAATTGGGTGGTGTTGTATGGGGCAACGGGCAGACCTTTCGCGAACATCTCAGCGCGCACCCGAGATGCACGGGCGGTCTCACGTTCATCTAGCTCTTTCTTCTCCTCCCAGGTTAATTTGAAGTAAGGTTTCCAGCGGCGCTTCTTCTTGGAAGGTCGTCGCCGGTGTTTTTTCTTGCCCTGCCGGCCATCTGACAGCCCCTCGGTGTTTACTGTCGTGCAATCACTGTCTCTCTTTTTATCCACAGGAAAGCCGTCGTCACTTGCTGCGTCACCAGCCTTGGGCTCCGGATCACTCCTATCCCGGCCGCGGCACATAGGATGTGTATCTCCAGACACCAAACCCGGACAGATCTCCAGCTGGTTTCTTTGCACTTGTTTCGAGGAGACGACACTTGTCAGACCATCCCTCTGCCGCCCTCTGCTGTCATCCTCCAGTGCAGCTTCTTCTTTATTAAGCTCCAT

Function

symbol description
hexim1 Predicted to enable 7SK snRNA binding activity and cyclin-dependent protein serine/threonine kinase inhibitor activity. Acts upstream of or within protein-containing complex assembly. Predicted to be located in nucleus. Predicted to be active in cytoplasm and nucleoplasm. Is expressed in head. Orthologous to several human genes including HEXIM1 (HEXIM P-TEFb complex subunit 1).

NR:

description
PREDICTED: protein HEXIM

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127443 True 1727 lncRNA 0.45 2 7171397 7173329
TU127446 False 1127 lncRNA 0.51 2 7129610 7172983

Neighbor

gene id symbol gene type direction distance location
plxdc1 plxdc1,LOC107732187,LOC107566549,LOC107694606 coding upstream 167626 6799785 ~ 6961984 (+)
LOC122355310 LOC107569775 coding upstream 545667 6581588 ~ 6583943 (+)
LOC122355059 adprh,LOC108411014,LOC108274007,LOC105894051 coding upstream 737779 6324493 ~ 6391831 (+)
med1 med1 coding upstream 1266320 5840203 ~ 5863290 (+)
LOC122355830 tceb2,LOC108280902,LOC107564001,LOC103036770,LOC108427344 coding upstream 1363767 5762494 ~ 5765843 (+)
plcd3b plcd3b,LOC107751666,LOC107561636,LOC107662566 coding downstream 10101 7183430 ~ 7219444 (+)
nmt1b LOC107561637,LOC107662571,LOC107758416 coding downstream 52533 7225862 ~ 7233649 (+)
svild LOC107758427,LOC107675649,LOC107561632 coding downstream 60609 7233938 ~ 7292140 (+)
znf281b LOC107727698,LOC107584153,LOC107661093,LOC107594149 coding downstream 193005 7366334 ~ 7374805 (+)
muc13b NA coding downstream 205598 7378927 ~ 7385963 (+)
G86106 NA non-coding upstream 34300 7094999 ~ 7095310 (+)
G86097 NA non-coding upstream 118198 7011188 ~ 7011412 (+)
G86095 NA non-coding upstream 120432 7007827 ~ 7009178 (+)
G86047 NA non-coding upstream 455540 6673340 ~ 6674070 (+)
G86046 LOC101886504,LOC101886427 non-coding upstream 458276 6670314 ~ 6671334 (+)
G86131 NA non-coding downstream 48199 7221528 ~ 7221955 (+)
G86140 NA non-coding downstream 123989 7297318 ~ 7297543 (+)
G86141 NA non-coding downstream 124354 7297683 ~ 7298034 (+)
LOC122355189 NA non-coding downstream 144171 7317500 ~ 7319591 (+)
G86202 NA non-coding downstream 214339 7387668 ~ 7388981 (+)
G86029 NA other upstream 607039 6521829 ~ 6522571 (+)
G86019 LOC107570179 other upstream 688084 6440821 ~ 6441526 (+)
G85986 adprh,LOC108411014,LOC107726130,LOC105894051,LOC108274007 other upstream 913043 6214919 ~ 6216567 (+)
G85962 NA other upstream 1032878 6095948 ~ 6096732 (+)
becn1 becn1,atg6 other upstream 1176124 5886952 ~ 5953486 (+)
G86142 NA other downstream 129809 7303138 ~ 7304848 (+)
G86143 NA other downstream 134595 7307924 ~ 7308229 (+)
LOC122355675 NA other downstream 642494 7815823 ~ 7844083 (+)
msrb1b msrb1b,LOC100705913 other downstream 931819 8105148 ~ 8106780 (+)
hbbe2 hbbe2,LOC107734191,LOC105910203 other downstream 1022635 8195964 ~ 8197904 (+)

Expression


Co-expression Network