G86142


Basic Information

Item Value
gene id G86142
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7303138 ~ 7304848 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU127489
tgtgacgagtcggctgcccctcctctttattgtcaccatcaccccgtcctttattcgccgcccttcaccaggctcccgacgggagtgggtgtgttcgagaggaggggcgtggtatcggccaggtctggcggcgtgtgacgaggcacacctgaaggggatttagccttgtcaccgccgccgttaaatgccctgcgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgtgaaggagctcgtcccgccgctagacaagcgcgtcgtgggaccccgtacagtccaggcgacgactgcacccggatacggctgacgggccaggatgccgagccgttaaatcccctaaatctctgacgaccggaggaaagaagcggcggaagaagccgccgcccctcgcgcccccgaacaggagaggggagcgcgtgcgaccgccggactccgccccttacctggaccctgcccccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttttatttggacacttttccccttggacactttattttgtactatttttgttaataaaaagcctctccgaggcctgacgccacgcccactgtgtctgtcgttggctcctcc
>TU127490
tgtgacgagtcggctgcccctcctctttattgtcaccatcaccccgtcctttattcgccgcccttcaccaggctcccgacgggagtgggtgtgttcgagaggaggggcgtggtatcggccaggtctggcggcgtgtgacgaggcacacctgaaggggatttagccttgtcaccgccgccgttaaatgccctgcgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgtgaaggagctcgtcccgccgctagacaagcgcgtcgtgggaccccgtacagtccaggcgacgactgcacccggatacggctgacgggccaggatgccgagccgttaaatcccctaaatctctgacgaccggaggaaagaagcgacggagatgccgcggaagaagccgccgcccctcgcgcccccgaacaggagaggggagcgcgtgcgaccgccggactccgccccttacctggaccctgcccccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttttatttggacacttttcccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttttatttggacacttttccccttggacactttattttgtactatttttgttaataaaaagcctctccgaggcctgacgccacgcccactgtgtctgtcgttggctcctcc
>TU127492
tgtgacgagtcggctgcccctcctctttattgtcaccatcaccccgtcctttattcgccgcccttcaccaggctcccgacgggagtgggtgtgttcgagaggaggggcgtggtatcggccaggtctggcggcgtgtgacgaggcacacctgaaggggatttagccttgtcaccgccgccgttaaatgccctgcgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgtgaaggagctcgtcccgccgctagacaagcgagccgttaaatcccctaaatctctgacgaccggaggaaagaagcgacggagatgccgcggaagaagccgccgcccctcgcgcccccgaacaggagaggggagcgcgtgcgaccgccggactccgccccttacctggaccctgcccccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttttatttggacacttttccccttggacactttattttgtactatttttgttaataaaaagcctctccgaggcctgacgccacgcccactgtgtctgtcgttggctcctcc
>TU127494
tgtgacgagtcggctgcccctcctctttattgtcaccatcaccccgtcctttattcgccgcccttcaccaggctcccgacgggagtgggtgtgttcgagaggaggggcgtggtatcggccaggtctggcggcgtgtgacgaggcacacctgaaggggatttagccttgtcaccgccgccgttaaatgccctgcgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgtgaaggagctcgtcccgccgctagacaagcgcgtcgtgggaccccgtacagtccaggcgacgactgcacccggatacggctgacgggccaggatgccgagccgttaaatcccctaaatctctgacgaccggaggaaagaagcgacggagatgccgcggaagaagccgccgcccctcgcgcccccgaacaggagaggggagcgcgtgcgaccgccggactccgccccttacctggaccctgcccccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttttatttggacacttttccccttggacactttattttgtatttgtactatttttgttaataaaaagcctctccgaggcctgacgccacgcccactgtgtctgtcgttggctcctcc
>TU127496
tgtgacgagtcggctgcccctcctctttattgtcaccatcaccccgtcctttattcgccgcccttcaccaggctcccgacgggagtgggtgtgttcgagaggaggggcgtggtatcggccaggtctggcggcgtgtgacgaggcacacctgaaggggatttagccttgtcaccgccgccgttaaatgccctgcgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgtgaaggagctcgtcccgccgctagacaagcgcgtcgtgggaccccgtacagtccaggcgacgactgcacccggatacggctgacgggccaggatgccgagccgttaaatcccctaaatctctgacgaccggaggaaagaagcgacggagatgccgcggaagaagccgccgcccctcgcgcccccgaacaggagaggggagcgcgtgcgaccgccggactccgccccttacctggaccctgcccccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttttatttggacacttttccccttggacactttattttgtactatttttatttttgttaataaaaagcctctccgaggcctgacgccacgcccactgtgtctgtcgttggctcctcc
>TU127497
tgtgacgagtcggctgcccctcctctttattgtcaccatcaccccgtcctttattcgccgcccttcaccaggctcccgacgggagtgggtgtgttcgagaggaggggcgtggtatcggccaggtctggcggcgtgtgacgaggcacacctgaaggggatttagccttgtcaccgccgccgttaaatgccctgcgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgtgaaggagctcgtcccgccgctagacaagcgcgtcgtgggaccccgtacagtccaggcgacgactgcacccggatacggctgacgggccaggatgccgagccgttaaatcccctaaatctctgacgaccggaggaaagaagcgacggagatgccgcggaagaagccgccgcccctcgcgcccccgaacaggagaggggagcgcgtgcgaccgccggactccgccccttacctggaccctgcccccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttttctggaccctgcccccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttttatttggacacttttccccttggacactttattttgtactatttttgttaataaaaagcctctccgaggcctgacgccacgcccactgtgtctgtcgttggctcctcc
>TU127499
tgtgacgagtcggctgcccctcctctttattgtcaccatcaccccgtcctttattcgccgcccttcaccaggctcccgacgggagtgggtgtgttcgagaggaggggcgtggtatcggccaggtctggcggcgtgtgacgaggcacacctgaaggggatttagccttgtcaccgccgccgttaaatgccctgcgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgtgaaggagctcgtcccgccgctagacaagcgcgtcgtgggaccccgtacagtccaggcgacgactgcacccggatacggctgacgggccaggatgccgagccgttaaatcccctaaatctctgacgaccggaggaaagaagcgacggagatgccgcggaagaagccgccgcccctcgcgcccccgaacaggagaggggagcgcgtgcgaccgccggactccgccccttacctggaccctgcccccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttcccctggaacactacctgaccttccacaatcccagaagcacaacgagggcaccagtttccccttttatttggacacttttccccttggacactttattttgtactatttttgttaataaaaagcctctccgaggcctgacgccacgcccactgtgtctgtcgttggctcctcc

Function

GO:

id name namespace
GO:0000003 reproduction biological_process
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process
GO:0022414 reproductive process biological_process
GO:0051704 multi-organism process biological_process
GO:0003006 developmental process involved in reproduction biological_process
GO:0046332 SMAD binding molecular_function
GO:0070412 R-SMAD binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127489 False 672 lncRNA 0.62 2 7303138 7304848
TU127490 True 763 lncRNA 0.61 2 7303138 7304848
TU127492 False 616 lncRNA 0.61 2 7303138 7304848
TU127494 False 689 lncRNA 0.61 2 7303138 7304848
TU127496 False 689 lncRNA 0.61 2 7303138 7304848
TU127497 False 761 TUCP 0.61 2 7303138 7304848
TU127499 False 741 lncRNA 0.61 2 7303138 7304848

Neighbor

gene id symbol gene type direction distance location
svild LOC107758427,LOC107675649,LOC107561632 coding upstream 10998 7233938 ~ 7292140 (+)
nmt1b LOC107561637,LOC107662571,LOC107758416 coding upstream 69489 7225862 ~ 7233649 (+)
plcd3b plcd3b,LOC107751666,LOC107561636,LOC107662566 coding upstream 83694 7183430 ~ 7219444 (+)
plxdc1 plxdc1,LOC107732187,LOC107566549,LOC107694606 coding upstream 341154 6799785 ~ 6961984 (+)
LOC122355310 LOC107569775 coding upstream 719195 6581588 ~ 6583943 (+)
znf281b LOC107727698,LOC107584153,LOC107661093,LOC107594149 coding downstream 61486 7366334 ~ 7374805 (+)
muc13b NA coding downstream 74079 7378927 ~ 7385963 (+)
lrp2b LOC107753462,LOC107669174,LOC107584197 coding downstream 98704 7403552 ~ 7472715 (+)
mpp3b mpp3b,LOC107669230,LOC107594152,LOC107584156,LOC107753440 coding downstream 168875 7473723 ~ 7486698 (+)
ppp1r3cb ppp1r3cb,LOC107584161,LOC107753441,LOC107758435,LOC107704020,LOC107594153,LOC107669176 coding downstream 182872 7487720 ~ 7492825 (+)
G86141 NA non-coding upstream 5104 7297683 ~ 7298034 (+)
G86140 NA non-coding upstream 5595 7297318 ~ 7297543 (+)
G86131 NA non-coding upstream 81183 7221528 ~ 7221955 (+)
G86110 hexim1,LOC107733802,LOC107661096,LOC107662567,LOC107561639,LOC107751667,LOC107576140 non-coding upstream 129809 7129610 ~ 7173329 (+)
G86106 NA non-coding upstream 207828 7094999 ~ 7095310 (+)
LOC122355189 NA non-coding downstream 12652 7317500 ~ 7319591 (+)
G86202 NA non-coding downstream 82820 7387668 ~ 7388981 (+)
G86219 NA non-coding downstream 197730 7502578 ~ 7504499 (+)
G86275 NA non-coding downstream 396495 7701343 ~ 7701799 (+)
G86283 NA non-coding downstream 414136 7718984 ~ 7719283 (+)
G86029 NA other upstream 780567 6521829 ~ 6522571 (+)
G86019 LOC107570179 other upstream 861612 6440821 ~ 6441526 (+)
G85986 adprh,LOC108411014,LOC107726130,LOC105894051,LOC108274007 other upstream 1086571 6214919 ~ 6216567 (+)
G85962 NA other upstream 1206406 6095948 ~ 6096732 (+)
becn1 becn1,atg6 other upstream 1349652 5886952 ~ 5953486 (+)
G86143 NA other downstream 3076 7307924 ~ 7308229 (+)
LOC122355675 NA other downstream 510975 7815823 ~ 7844083 (+)
msrb1b msrb1b,LOC100705913 other downstream 800300 8105148 ~ 8106780 (+)
hbbe2 hbbe2,LOC107734191,LOC105910203 other downstream 891116 8195964 ~ 8197904 (+)
arsg arsg,LOC107734203,LOC107660857,LOC107692046,LOC107554066 other downstream 1531600 8836448 ~ 8852449 (+)

Expression


Co-expression Network