G86230


Basic Information

Item Value
gene id G86230
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7502577 ~ 7504461 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU127605
ccagcactaaaattattacttttattcgCCAAgggatgtgttaaattgattaaaagtgacaatatatacatttaaatacatttagtaataCAGTAAAGgcatacaaaattacaaaatattttaaacaaatgttaactttatttattaaaaaatgctgaaatacatatattatggtttctacataaatattaaccagcacatctgtttttaaaatgaataataataattggatcatgcgacactgaagactgtagtaatGACTGCTTTGCAATCACAGGgataaacaacattttcaaataaacgaaaacagttattttgttaataataataacaataataaaataaacacagccttggTGATCAGAAGAGATGTTTTTAGTAACCTTAGAAAATCGTAGATAGAGAGGTAGAATACaaacttaaaaatgacttattaGTTAGTTGCTGATAAGGATGAAAGAGCACtttatttcttacatttctgCAGTAAATTCCACTTCTTGTCATGCCAATTAAAATTCCAATTCAGCTTCCTTTGTGCTAAATTCAATTCACACTCATGAAGGAATTAGTAGAGAGACAATTCAACTGTTCTGAGTTTTGCGCAATCCTAGCAGCCACATCAGGTAAGCAGGAGGATAATGCACAGCAGTGATAATGTAAGCTCTAGATGTAACGTTTAAGCAGGATGATATATTGTGGAATGTGTGTAAAAAGTAGTATTAATTGTTGTAAACCAGGGTTTTGTGAGGAACCCAGTTAAGATATTCATCTTTAGTCACTGTGCGATTTGCACACATCATTGCTAACTGTTTGAGTGAAGGACCGAACATTTCGTGTGGTATTAGAATATGTGGAATTTATGGATGATATAGTGTAAATCTGTTCAAGAAGCTCTATTTTACTGCAATgtgaaattaaagttaaaatgttaaggatttttttcttcagcgcGGGCCTGATAATGCCCCGTGCTCCTGTTAAAAGTAGGTCAATAAGGGGCTTGGTCTCAGCTAAAATAGCCTGGCAAACAGTCTGTCAAACTTGCCCAgcattcttaaagggacagcgcTCTGTCTCCAGGGATACAGGAGCCCACAGTTATTAAAAGCTCCTGTGTGAAACGTTCCTTAACTCAAGCATTCCCTCTGCTTCCGATTAGCTtctaaaatgtagcttttaatAAACTAACGATCTTTTCAAATTTAAGGTCTGAGCTCAAATGTCGGTTGCGTGTAGTTTAGTACTTGTTGACAACCCTTTCTCAACCTCTCTCGGGCATGAAAGGAATATTGGTAATGTGActagattttgtgtgtgtgtgtgtgtgtgtgtgtcagcaatTGTTTCATGTTCGTTTACTAGCCATAACATGGAAGAACTGTTTGCGCTTATTTGAAtctttttagttgttgtttgtttgtttgaatagTGATTCCGGTTATTCTTCATATAGAGCGGTTAACAGCAGTATTggtcacaacaaaaaaaaaaaacataatttatttttctgactaATGCTCTGCTTCGTGCCATCAGTGGCACAATTCATTTAGGACTCAAGGTCTAGTGATACTGCGGTATGTTAGTATGCTAGTGGATGACCTTTAACTAGTGGGGTGTACATCAGTCTTCCTATCTATCGGGGCTTGGCTTGTGTGATTAGCTGgtgcatttttgcatatttctgGCTCATCATGTCATGTGATTTTCATTGGGCTCATgctttatgtgtatttatgtcacCTGTCAATCTGAATCACTCCAGATTGCTATGCTCCACATGCTATTGTTTCATGTTCTGCGATGActgaatacaaatgtatttacaatgtatttatttcaactttgctcattcatttttaatgaataaagttatacagca

Function

GO:

id name namespace
GO:0044451 obsolete nucleoplasm part cellular_component
GO:0005654 nucleoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127605 True 1885 lncRNA 0.35 1 7502577 7504461

Neighbor

gene id symbol gene type direction distance location
kcnj19b si:dkey-100n10.2,LOC107584158,LOC107758432,LOC107661094,LOC108424892,LOC107727700,LOC108273498 coding downstream 137562 7359383 ~ 7365015 (-)
acbd4 LOC107661095,LOC107733800,LOC107662569 coding downstream 319743 7174618 ~ 7182834 (-)
hexim1 hexim1,LOC107733802,LOC107661096,LOC107662567,LOC107561639,LOC107751667,LOC107576140 coding downstream 329209 7171396 ~ 7173368 (-)
LOC122355417 adprh,LOC108411014,LOC108274007,LOC105894051,LOC107726130,LOC106579059,LOC107571852 coding downstream 1222229 6197482 ~ 6280348 (-)
neurod2 LOC107571318,LOC107676581,LOC107732719,LOC107701796,LOC107568320 coding downstream 1480421 6017991 ~ 6022156 (-)
hectd2 hectd2,LOC107584154,LOC107758436,LOC107594154,LOC107753452 coding upstream 255 7504716 ~ 7521406 (-)
pcgf5b pcgf5b,LOC107584148,LOC107594155,LOC107669177,LOC107753439,LOC107758437,LOC107704022,LOC108410714 coding upstream 22615 7527076 ~ 7538565 (-)
rpp30 rpp30,LOC107669172,LOC107584236,LOC107753460,LOC107758421,LOC107683719,LOC107594207 coding upstream 47671 7552132 ~ 7554852 (-)
LOC122355224 LOC107758424,LOC107594208,LOC107669182,LOC107584235,LOC107753458,LOC100536080,LOC107683721 coding upstream 68710 7573171 ~ 7578201 (-)
LOC122355798 LOC107753456,LOC107669160,LOC107584195,LOC107594195 coding upstream 100392 7604853 ~ 7608716 (-)
G86210 LOC107758434,LOC107584156,LOC107669230,LOC107594152 non-coding downstream 15502 7480055 ~ 7487075 (-)
G86216 NA non-coding downstream 26447 7469027 ~ 7476130 (-)
G86201 NA non-coding downstream 116594 7380107 ~ 7385983 (-)
G86199 NA non-coding downstream 125382 7376898 ~ 7377195 (-)
G86183 NA non-coding downstream 197729 7303134 ~ 7304848 (-)
G86232 NA non-coding upstream 18203 7522664 ~ 7523001 (-)
G86324 LOC107683711,LOC107669213,LOC107594157 non-coding upstream 83850 7588311 ~ 7590983 (-)
G86325 NA non-coding upstream 88340 7592801 ~ 7596998 (-)
G86330 ch25h,LOC107753436,LOC107584143,LOC107669234,LOC107683723,LOC107758440,LOC107594211 non-coding upstream 111407 7615868 ~ 7617213 (-)
G86334 NA non-coding upstream 126935 7631396 ~ 7634556 (-)
G86203 NA other downstream 113667 7388236 ~ 7388910 (-)
G86108 NA other downstream 398359 7103880 ~ 7104218 (-)
G86049 LOC101886504,LOC101886427 other downstream 831330 6670319 ~ 6671247 (-)
LOC122355418 pnmt,LOC107571312,LOC107676565 other downstream 1424509 6051168 ~ 6078068 (-)
G85930 LOC107711793,LOC107755027 other downstream 1490466 5990913 ~ 6012111 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other upstream 829943 8334404 ~ 8359992 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other upstream 1006942 8511403 ~ 8513265 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other upstream 1106091 8610552 ~ 8612445 (-)
plbd1b LOC107578697 other upstream 1177982 8682443 ~ 8687548 (-)
trnar-ccu_66 NA other upstream 1183037 8687498 ~ 8687570 (-)

Expression


Co-expression Network