G86775


Basic Information

Item Value
gene id G86775
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8535973 ~ 8538206 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU128385
gaccggtagcatcgcagtcaaaaaaaattgcagttttgatatttttcgtATTTAAAActggactcttctgtagttatatcgtgcACTAAGACCGGTGGGAAATGAAAAGcaatatgattaggaactatactgtcattctggcgtaataatcaaggaagtttgttGCTGTACCATGGCCGCAGCAGGTGCAGTGACATCATGCAGTATCGAAActctttaataatttttttatgtgatgctactggtctaattggattcaatgatctatgctaagctatgctaaaagtgctatccagccccggagatcggctgaatagattaaAAAACTTAGTGTTTAATGATAATAtcttcattttggggtggagcaaCCCCGTGATGTTACACCATTCACAGTTTCCTATTCATTGAATATGGTACAGTGAACCAAtgtacaggttttactcaagcATGTTTTAcactatatttttgttaaaatgacaatttcaCAAGTGTTTTCATTAAGATGATCTTTACCTTCAGGGCTTTACTGGCTCTGCCGTCTGAAGTCATTGTCTGGGTTTATGTATCCCTGAAGCctgtaaatgtcaaataaacCATTTAAGTAAAATGGAGTACAtggaataaaaattatattcacaATAATGCGAAATCTTTGGGTGccttgcttttattaaatatttacagcacaatacaaatattatggactcaaaatttgtattaatatgtTTTGCCAAGTAATTTTTATCTTAATagctaaatatacattttaatccGCCCTGAAATCAAGCATTAAAAGACACAGTTGACTACCAAGAACAAGTGCATGGCATCATATAGTGTATTTTAGCACACAataaggaagaaaaagagaggaactatgcttatttaaatatatatatatatatatataagtggtTCGTGTGGTCAGCTCGTGAACACTCAATCTTAAGACCATTTAAAGACAATAAACCTCCAGTTCTTATTTTCATCTTTCTAAATCTAGGATTCCCGAATCCAAAGagtagcacttttttttttcctgatagTGAATCATGACTGGTCGAAGTCCAGATGAAGAAGTGAACGCCGCTGACCACGAGTTTCCCGTCATGCGTGGGAAGTGCGCCTATCGTCCGCGAGCTGCTGCCTCAAATAACCGACCGAGCTTTTCTTCAGAGTCACAGTGATTCAGCACAAGTCCTCCATTCCCGACTTCACAGCAGCTCCTTACTTTCCTTTCGCATTTCTCGTGTCGCGTTATTGATCAAATTCCCAGTTACTTCACGTCAGTCACAACAAATATCACCACTCACTTATAAACGGTTTATAAAACTCCTATTtagtaaacaacaacaaaacaggtCTTGCGCTGTCATTTCCCCCGAAACGTCTCGAGGTTGAAGTGTTGCGTTATTTACAAAGCgccaaattaataaaatgatttcaaatctaacttttaaatatcaataaaacacaataaaggaTTCTAACGACGTAAGGACCCGTTTATTACGTAAGATACTACTAGTTCAAACCAAACCAAGATTTTGCTGACTAGTGGTTTCTCATCGAAAACAACATACATGTTTACGCGTTTTGAGTAGTTACGAACATAATTCACACAGTTATGTTGAATACAAATGTATAGTTTAACTGTCTGAACCGACAACATCTAAGCAGCTATTTCCTTATTACGCGTTAGCTTGTTGCTACACATAACATCGTGGTAAAAACATGCTATTCGCGCGCGTGAAgactaatattatttaaaaatatataaaatacgaCTCTAAATGATAGGTTGGTGTACGAATCTAAACCATAAGAGTACGAGCAGCGGGTTTTACGTTAAAACAAACACTGAGTGCATGTACGTTAACGTTACAGCGGATTTGCTAACACCCCTCCGTTTCCTTAGTGTAAACAAATGTCGAAAggagaaaaaatagaaaatcttGCCTGGTGTTGATTTCTCCTCTTTGTTGATTCACACGAAGCTGAGTATACGGATCGGTCCACGATTCTCACCGCTGGTTCGGTATTTCGACTGACATACGTTATCGCAGCACGGCCCGTGTTTAGACGGACTAGAAAGCTAAACGCCTTTTTCCCGGAATCAGTCCACCATCAGCGGGCTGGATCctttcattcataaaaaacacacacacga

Function

GO:

id name namespace
GO:0019221 cytokine-mediated signaling pathway biological_process
GO:0071345 cellular response to cytokine stimulus biological_process
GO:0034097 response to cytokine biological_process

KEGG:

id description
ko04144 Endocytosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU128385 True 2170 lncRNA 0.38 2 8535973 8538206

Neighbor

gene id symbol gene type direction distance location
tomm22 tomm22,LOC107690071,LOC107554024,LOC107734246,LOC107584213,LOC107692102,LOC107731386 coding downstream 1332 8531984 ~ 8534641 (-)
dmc1 dmc1,LOC107690066 coding downstream 4720 8528745 ~ 8531253 (-)
gspt1 gspt1,LOC107692072,LOC107690055,LOC107734224,LOC107554042 coding downstream 7499 8520500 ~ 8528474 (-)
rsl1d1 rsl1d1,LOC107584214,LOC107734245,LOC107554037,LOC107692074,LOC107682682 coding downstream 15920 8517178 ~ 8520053 (-)
LOC122355887 NA coding downstream 16864 8518980 ~ 8519109 (-)
tmem184ba tmem184ba,LOC107690057,LOC107584104,LOC107554044,LOC107731404,LOC107692069 coding upstream 3013 8541219 ~ 8549833 (-)
csnk1e csnk1e,LOC107584103,LOC103024972,LOC107731422,LOC107690058,LOC107734231,LOC108431980 coding upstream 12178 8550384 ~ 8555651 (-)
tnrc6ba LOC107584179,LOC107690060,LOC107692068,LOC107734183,LOC107731400,LOC107554046 coding upstream 18069 8556275 ~ 8570074 (-)
sh3bp1 sh3bp1,LOC107692101,LOC107731399,LOC107690072,LOC107554025,LOC107734168,LOC107584210 coding upstream 53535 8591741 ~ 8600914 (-)
pdap1a pdap1a,LOC107734239,LOC107584100,LOC107690063,LOC107554049,LOC107731397 coding upstream 64004 8602210 ~ 8606138 (-)
G86608 NA non-coding downstream 191364 8344336 ~ 8344609 (-)
G86606 NA non-coding downstream 196158 8339456 ~ 8339815 (-)
G86576 NA non-coding downstream 245563 8290080 ~ 8290410 (-)
G86553 NA non-coding downstream 336849 8198918 ~ 8199124 (-)
G86505 LOC107692108,LOC107584217,LOC107734162,LOC107669195,LOC107731388 non-coding downstream 345688 8187641 ~ 8190285 (-)
G86798 NA non-coding upstream 59188 8597394 ~ 8628972 (-)
G86807 NA non-coding upstream 85091 8623297 ~ 8626329 (-)
G86809 LOC107731413,LOC107584098,LOC107734194,LOC107663181 non-coding upstream 88888 8627094 ~ 8630207 (-)
G86825 NA non-coding upstream 137440 8675646 ~ 8747077 (-)
G86826 NA non-coding upstream 141899 8680105 ~ 8744645 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other downstream 22708 8511403 ~ 8513265 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other downstream 175981 8334404 ~ 8359992 (-)
G86203 NA other downstream 1147063 7388236 ~ 7388910 (-)
G86108 NA other downstream 1431755 7103880 ~ 7104218 (-)
G86049 LOC101886504,LOC101886427 other downstream 1864726 6670319 ~ 6671247 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other upstream 72346 8610552 ~ 8612445 (-)
plbd1b LOC107578697 other upstream 144237 8682443 ~ 8687548 (-)
trnar-ccu_66 NA other upstream 149292 8687498 ~ 8687570 (-)
LOC122355288 LOC107660874 other upstream 337411 8875617 ~ 8878131 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other upstream 773447 9311653 ~ 9939849 (-)

Expression


Co-expression Network