G86807


Basic Information

Item Value
gene id G86807
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8623297 ~ 8626329 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU128428
cattgTCTAAAACAGTCTATTTATTGTTAAACACTTTCATGAGATTTTGGTCCACTGTGATCAATATTTCACTTCCAACCAGggagaaaaaaggagaaacaaaacaaacaaatgtaaaaatacagtacaaaaagaggcattgttgtttttccttttcatttttttttttttcaaaaccctGATTTTTACTGGTTATTTAAGCAGGTGAAAAATAAAGCCAACCGAAACATCTCAACCGATATAATCCAACATTTGCTAAACCCCACATTGTCTTTTCAGGCAGAACATGAATTATTATGAACATATTTCTGCTTTACACTTCTAGAAAGTGCGCAACacaaagatcattttaaaaatgaacaaccTTCCTTAGTTTTGAGGTCTAGAGAGCCCAGAACATTCCAGTTCTGTgataaaataaactcaaatggAGAATGAGGATGAGTTAATGACCATTACTGCAGCCTCCAGGCAGTCAATGGCCAGCAGTACTAACCCTTtgatatgaatatgaatgattGCAAATTCCATCCCATGTTTGAACAACAGAGACTGTTAACTgaggttgtttttttctctcgccGGCTCTGCACACTACTTCAGATCTACCATCTCAGCATGATCACGTGCCTCAGAAAATTCAGATTAGAGTCATGTGCAAAACCAGTCTCTGTTGCAAATCTAGAGAACATTAACGATACACTTCCCTCCCCTATTTCTTTAAACAAGTTGTCTAACGGTGTGTATATATCATTATACTGAAAGAGTAGGATTATTTGTTAAGGTATTTATAATCGTATATAAATGTATCGTATAAGGCGCTATGCAGACAAACATAAATATCCATGTATGCTTTGTGTCCCGTCCCAGTATAGCGCTGTGAGGATCGAATCAAATCAATCAAGAACGTGGTGCAGATGAAAGTTGCTAAGGCAATAAAATTGCTGATGTCTTTTCACTACAACCACTCTATAAACCCTCTTAAAAGAGATCCTGGGTTTCAGAAGAATGACGGGAACTAAAACACATCACAAAAGCATGACACCCTAAATGTTAACAGCGTCACTTGCTTTTCATTGATTAAATTGAAAGGAAACAAGACAGATAACTACCCTAGGATCTCAATTCCTCTATTCTGGACAGCTCACTAAGCATACATAGGCATAATTCACTGTTAAGTATTATATTCATACATGgatacatatatttaaagtgttataCATAGCaattaacatatacatatatcaaTAGCATATAGGAAGATAGAAGTAGTCATAATGGCAATCATTATCATCACTGTCATCATCATAATAATAGCAGTAGTAATAATATGATCCCTCGGTAAAGCGTACTAGGTCACTCCAGAACGTCCCTCTCAATCTCCACACTGCAATCTGTTACCAGGCCAAAACCTGCTCCTTCACATGTCATTAAAACCCTGGAATTCAATGCAAAGTACAAACTCAATTCTATTTTCTATAACAAACCAATCTCAGGGTGCTTCGATTACCATTCTATAGCCTTTATAGGCAGTTTGAGGCAGCAAATTCTCATAGATCTCACAAACCGGACACTTCTGGAATGActcataagaaaaaataaaattaaaaaaaaaaaaaaatcactaaGGGTAGCACTGCATGTCTTGACAGTATATTATGAATTAACTACACATAGGCAGGGCAAGTACAGCTCTTTTGCCTATATTCTTGTAATGCGTCTCCGTTCATGCTCTTAATATGAAACCAATAGATCGTAAATATGGAGAACTAATGAGCTACTGGCCCGCGCTGAACTATGAGTCTCCTAGTAGCATGTTTATGGGTGTTACAGATTACGCACTTCAAAAACCCATCTAATAGCTTGAATGAACAAACACAGAAGCATCTTCCAACCTCCAAtcactcaaagaaaaaaaaatacaaaagtgtattttcaaTCTAAATTAGTCAGATCACTCAAGACTACAAACAGCCCTTGTGTGCACTCTTTCATCTTCTTTATCAAGCACTGCCAAACTGTCCCTCAGTGCAAATGGAAAGAATGAGGAAATGTGTGCATGTCAGTGCAAGATCTGTGACTGGCATTTTGCAAGTTTGGGATGGTTTTTACTTAGTCCATTATTAATTGCCTTGGTTTATCAAATACATTCGACATCCAAACAAATCtcaaatttcttttaaatggcCACTTATGGCTGTACATTCAAACTCTTCTACCAATATGGCAGGAACACAGAGTTAAGCACCACTTCATAACTTCAATCTGATGCCAAATACTTGACTGAAATATGAGTGGCCTTCATGCCAGGTGCTTTGATTTAATACAGGGAGAACCAGTCTGTTTTGGTTTTGAGTTTAAAAAGCACTGTGGGAATAGATCTTTAAATGCTCAGAAATGTGTTTAGggaacataaaaacaaactgcCCTTATTTGAGTTAGCTGTGAAAGTACCAGTGTGCACTCACATGACACCCTACGAGCTTGTCAAGTGTCATGTCAGTGAATGGGCAAATGTGTTTGATAATGGGTGAAAAAGcatgtcaggtgtgtgtgtgtgtgtgtgtgtgtgtgtagcaacAATCACTGTGTTTTTTCAGTCCTATAATCAGGCTCTCTGCCCTGGGGGCATCAGAGCCTGGTACTTCCCAGAGTGGCACTGAAAGAGTGGGAAAGGGCCTTAGAAGCTGACATCTGAACAGGAAGACTCATCCAGACTGCCTGGAACCACACACTTCCGGGCCCAGGTCACAGATCCCCTCCACCACCAGACATCCGGCGCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128428 True 2785 lncRNA 0.38 2 8623297 8626329

Neighbor

gene id symbol gene type direction distance location
cby1 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 coding downstream 10836 8611249 ~ 8612461 (-)
slc16a8 slc16a8,LOC107734169,LOC107690073,LOC107584209 coding downstream 12073 8606637 ~ 8611224 (-)
pdap1a pdap1a,LOC107734239,LOC107584100,LOC107690063,LOC107554049,LOC107731397 coding downstream 17159 8602210 ~ 8606138 (-)
sh3bp1 sh3bp1,LOC107692101,LOC107731399,LOC107690072,LOC107554025,LOC107734168,LOC107584210 coding downstream 22383 8591741 ~ 8600914 (-)
tnrc6ba LOC107584179,LOC107690060,LOC107692068,LOC107734183,LOC107731400,LOC107554046 coding downstream 53223 8556275 ~ 8570074 (-)
LOC122355698 phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 coding upstream 8563 8634892 ~ 8636912 (-)
LOC122355697 phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 coding upstream 11082 8637411 ~ 8638883 (-)
kctd17 kctd17,LOC107584096,LOC107734225,LOC107692061 coding upstream 42067 8668396 ~ 8681985 (-)
l3mbtl2 LOC107734235,LOC107584094,LOC107663177,LOC107692058,LOC107709654,LOC107554057 coding upstream 72164 8698493 ~ 8705084 (-)
cbx7b LOC107660863,LOC107734182,LOC107584093,LOC107554058,LOC107692056,LOC107709653 coding upstream 102480 8728809 ~ 8732989 (-)
G86775 NA non-coding downstream 85091 8535973 ~ 8538206 (-)
G86608 NA non-coding downstream 278688 8344336 ~ 8344609 (-)
G86606 NA non-coding downstream 283482 8339456 ~ 8339815 (-)
G86576 NA non-coding downstream 332887 8290080 ~ 8290410 (-)
G86553 NA non-coding downstream 424173 8198918 ~ 8199124 (-)
G86809 LOC107731413,LOC107584098,LOC107734194,LOC107663181 non-coding upstream 765 8627094 ~ 8630207 (-)
G86825 NA non-coding upstream 49317 8675646 ~ 8747077 (-)
G86826 NA non-coding upstream 53776 8680105 ~ 8744645 (-)
G86848 gna13a,LOC107660858,LOC107584085,LOC107734232,LOC107554062,LOC107692049 non-coding upstream 195551 8821880 ~ 8823436 (-)
G86852 arsg,LOC107734203,LOC107660857 non-coding upstream 212022 8838351 ~ 8838612 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other downstream 10852 8610552 ~ 8612445 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other downstream 110032 8511403 ~ 8513265 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other downstream 263305 8334404 ~ 8359992 (-)
G86203 NA other downstream 1234387 7388236 ~ 7388910 (-)
G86108 NA other downstream 1519079 7103880 ~ 7104218 (-)
plbd1b LOC107578697 other upstream 56114 8682443 ~ 8687548 (-)
trnar-ccu_66 NA other upstream 61169 8687498 ~ 8687570 (-)
LOC122355288 LOC107660874 other upstream 249288 8875617 ~ 8878131 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other upstream 685324 9311653 ~ 9939849 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other upstream 855230 9481559 ~ 9489312 (-)

Expression


Co-expression Network