G86825


Basic Information

Item Value
gene id G86825
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8675646 ~ 8747077 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU128455
CTTTCAGAACGTCTTTATTTGTTTAGACAATGATgtttaacacacatttacacagaaatgaGGTTTATTTGAGGCAGGAAATTAAGAGCTCTAAATAGTACTTACTGAAAAACAGTAGCACAGATAAATCAGGCAGCATAACCTCAAcctaaaataaatcttactgtGAGAGTATTACAAGGAATGTTTTTGATACATAAAATATCATGTTACAAATCTTTCATGCATTCTTATGAACcggttaaaaatatatgcacgGTCTCATTGCTAATGTGTTTGTTACGATTACACTGGTCCTATAGACTTTAGAGCGTTTACACCATTTACCATCAatgaattatatgaattataatgAGCTATGAATTAAATACTGCGAGTTTAATAATTACTTATTGTCACCAAAGccacattatacattatattactatattccTATCTTACCTTAACCAGAGTAACACATGTAAAAAGACGattgaataattgaaaaatacaaCAACTTTCCTACGGGGTTCATTGCTGGTGACACctgcacattttataaaacattcatgTGTGACGCTGTGCTTCCTATGACGTCACTGATCCCCTTAAAccctacatatatatatatatatttatatatatatatatatatatatatatatatatatta
>TU128456
CTTTCAGAACGTCTTTATTTGTTTAGACAATGATgtttaacacacatttacacagaaatgaGGTTTATTTGAGGCAGGAAATTAAGAGCTCTAAATAGTACTTACTGAAAAACAGTAGCACAGATAAATCAGGCAGCATAACCTCAAcctaaaataaatcttactgtGAGAGTATTACAAGGAATGTTTTTGATACATAAAATATCATGTTACAAATCTTTCATGCATTCTTATGAACcggttaaaaatatatgcacgGTCTCATTGCTAATGTGTTTGTTACGATTACACTGGTCCTATAGACTTTAGAGCGTTTACACCATTTACCATCAatgaattatatgaattataatgAGCTATGAATTAAATACTGCGAGTTTAATAATTACTTATTGTCACCAAAGccacattatacattatattactatattccTATCTTACCTTAACCAGAGTAACACATGTAAAAAGACGattgaataattgaaaaatacaaCAACTTTCCTACGGGGTTCATTGCTGGTGACACctgcacattttataaaacattcatgTGTGACGCTGTGCTTCCTATGACGTCACTGATCCCCTTAAAccctacatatatatatatatatttatatatatatatatatatatatatatatta

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU128455 True 652 lncRNA 0.30 2 8675646 8747077
TU128456 False 646 lncRNA 0.30 2 8675646 8747077

Neighbor

gene id symbol gene type direction distance location
LOC122355697 phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 coding downstream 36763 8637411 ~ 8638883 (-)
LOC122355698 phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 coding downstream 38734 8634892 ~ 8636912 (-)
cby1 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 coding downstream 63185 8611249 ~ 8612461 (-)
slc16a8 slc16a8,LOC107734169,LOC107690073,LOC107584209 coding downstream 64422 8606637 ~ 8611224 (-)
pdap1a pdap1a,LOC107734239,LOC107584100,LOC107690063,LOC107554049,LOC107731397 coding downstream 69508 8602210 ~ 8606138 (-)
mrtfab LOC107692050,LOC107734192,LOC107660860,LOC107584087,LOC107709647 coding upstream 34602 8781679 ~ 8808640 (-)
rgs9b rgs9b,LOC107660859,LOC107584086,LOC107734240,LOC107692097,LOC107709642,LOC108444257,LOC107554020 coding upstream 62005 8809082 ~ 8821062 (-)
LOC122355256 slc16a6a,LOC107554067,LOC107721990,LOC107692048 coding upstream 85005 8832082 ~ 8837257 (-)
snx11 snx11,LOC107734201,LOC107584079,LOC107660856,LOC106589286 coding upstream 98034 8845111 ~ 8852234 (-)
snf8 snf8,LOC107554070,LOC107692042,LOC107734219,LOC107584075,LOC107660854 coding upstream 122988 8870065 ~ 8872539 (-)
G86809 LOC107731413,LOC107584098,LOC107734194,LOC107663181 non-coding downstream 45439 8627094 ~ 8630207 (-)
G86798 NA non-coding downstream 46674 8597394 ~ 8628972 (-)
G86807 NA non-coding downstream 49317 8623297 ~ 8626329 (-)
G86775 NA non-coding downstream 137440 8535973 ~ 8538206 (-)
G86608 NA non-coding downstream 331037 8344336 ~ 8344609 (-)
G86848 gna13a,LOC107660858,LOC107584085,LOC107734232,LOC107554062,LOC107692049 non-coding upstream 74803 8821880 ~ 8823436 (-)
G86852 arsg,LOC107734203,LOC107660857 non-coding upstream 91274 8838351 ~ 8838612 (-)
G86853 NA non-coding upstream 93737 8840814 ~ 8841155 (-)
G86854 arsg,LOC107734203,LOC107660857,LOC107554066,LOC107692046 non-coding upstream 96310 8843387 ~ 8843774 (-)
G86856 NA non-coding upstream 105868 8852945 ~ 8853257 (-)
G86783 cby1,LOC107554026,LOC107734186,LOC107584208,LOC107690074 other downstream 63201 8610552 ~ 8612445 (-)
LOC122355061 tnfrsf17,LOC107554040,LOC107692075,LOC107690067,LOC107584106,LOC107734209 other downstream 162381 8511403 ~ 8513265 (-)
cpped1 cpped1,LOC107584109,LOC107669238,LOC107554009 other downstream 315654 8334404 ~ 8359992 (-)
G86203 NA other downstream 1286736 7388236 ~ 7388910 (-)
G86108 NA other downstream 1571428 7103880 ~ 7104218 (-)
LOC122355288 LOC107660874 other upstream 128540 8875617 ~ 8878131 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other upstream 564576 9311653 ~ 9939849 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other upstream 734482 9481559 ~ 9489312 (-)
cript cript,LOC107582781,LOC107728714 other upstream 2257929 11005006 ~ 11006954 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other upstream 2295811 11042888 ~ 11045889 (-)

Expression


Co-expression Network