G87164


Basic Information

Item Value
gene id G87164
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 10605232 ~ 10606019 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU128985
ggtttgaaataaattacagtttctaACATTTTTGATAGACGTTTCTTATGctcaacacagaaaacaaaaacagtaatagtgaaatattatagcaaataaaaaaataactgtaattttctCAAGCAATATTAACTTCTCCATTCTTGTTCAGCCATAGTACATTCAGTAGTGCCACCCTTCCTCCACCGTGATTGGTTGGCTGACtagacattataaaaataaaaataaaaaatacggTAGCTGCTGGGAAAAAATGCTTTGCTGGACATGCTGCCTCACTCCGGTTTTCAgtgacatgatccttcagaaatcattccaacttgattaaaataaatgtttaaacaaatgtggttgagctgcttaatgtttttctgagtgattatttacagaattttcatttatatcCCATCAGATATAAATttggatattttaaatatcaaatcttATTGatcttaatatttgtttaaagtaCATTTCTAATGTCTAATGTACCTTTGGTTTCAAGCAGACATTTAGGTGGTTGATTACATGacatagaatttaaaaaagaaaggatCTATAACACATACACAGGCAGTCGCCACACAGGTACCCCAGTCAGCATAGGTCTCCACTGTAATATTGGACAGTGCTGTGCGCATCAAAGGAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128985 True 651 lncRNA 0.33 2 10605232 10606019

Neighbor

gene id symbol gene type direction distance location
LOC122355804 nrg3b,LOC107566665,LOC107573948,LOC107678479,LOC107689960 coding downstream 460503 10138438 ~ 10144729 (-)
LOC122355287 fam20cb,fam20c,LOC107734234,LOC107699871,LOC107669229,LOC107731385,LOC108432010 coding downstream 799722 9788025 ~ 9805510 (-)
LOC122355272 cpped1,LOC107584109,LOC107669238,LOC107554009 coding downstream 849185 9743392 ~ 9756047 (-)
LOC122355289 ercc4,LOC107734247,LOC107669240,LOC107692079 coding downstream 864704 9734537 ~ 9740528 (-)
LOC122355243 LOC107734216,LOC107669223,LOC107584111,LOC107692080,LOC107554034 coding downstream 870892 9713064 ~ 9734340 (-)
chac2 chac2,LOC107749368,LOC107686371 coding upstream 4629 10610648 ~ 10613502 (-)
foxn2b LOC107698833,LOC107749364,LOC107550040,LOC107582787,LOC107728721,LOC107673647 coding upstream 294234 10900253 ~ 10915884 (-)
fbxo11b fbxo11b,fbxo11,LOC107728720,LOC107582786,LOC107550041,LOC107673644,LOC107698831,LOC108430631 coding upstream 312760 10918779 ~ 10931157 (-)
msh2 msh2,LOC107698830,LOC107582784,LOC107749362,LOC107550043,LOC107728724,LOC107673650 coding upstream 325843 10931862 ~ 10938013 (-)
socs5a LOC107582782,LOC107728716,LOC107698827,LOC107673648,LOC107550046,LOC107749358,LOC107550045 coding upstream 379023 10985042 ~ 10996581 (-)
G87125 svila,svil,LOC107584371 non-coding downstream 22696 10578754 ~ 10582536 (-)
LOC122355705 nrg3b,LOC107678479,LOC108426474,LOC107689960,LOC108273971,LOC107566665,LOC107387893 non-coding downstream 160454 10409339 ~ 10444778 (-)
G87104 NA non-coding downstream 243818 10360877 ~ 10361414 (-)
G87055 NA non-coding downstream 837994 9763102 ~ 9767238 (-)
G87034 NA non-coding downstream 970115 9632044 ~ 9635117 (-)
G87388 NA non-coding upstream 187044 10793063 ~ 10804738 (-)
G87376 NA non-coding upstream 210542 10816561 ~ 10864596 (-)
LOC122355137 NA non-coding upstream 262829 10868848 ~ 10894717 (-)
G87406 fshr,LOC107728706,LOC107582855,LOC107673646 non-coding upstream 289822 10895841 ~ 10896147 (-)
G87429 mta3,LOC107749351,LOC105904126 non-coding upstream 465230 11071249 ~ 11071765 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other downstream 665383 9311653 ~ 9939849 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other downstream 1115920 9481559 ~ 9489312 (-)
LOC122355288 LOC107660874 other downstream 1727101 8875617 ~ 8878131 (-)
trnar-ccu_66 NA other downstream 1917662 8687498 ~ 8687570 (-)
plbd1b LOC107578697 other downstream 1917684 8682443 ~ 8687548 (-)
cript cript,LOC107582781,LOC107728714 other upstream 398987 11005006 ~ 11006954 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other upstream 436869 11042888 ~ 11045889 (-)
G87489 NA other upstream 715404 11321423 ~ 11322603 (-)
G87569 NA other upstream 1226860 11832879 ~ 11835612 (-)
G87608 NA other upstream 1342521 11948540 ~ 11951155 (-)

Expression


Co-expression Network