G87343


Basic Information

Item Value
gene id G87343
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 11803287 ~ 11803627 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU129272
GTCATGTTAGAGTATCAGGATTTTAACAGAAGATGAACTCTCAACAGTCAATGTCACTGGCAAGGCTGATATTAAATCTGTCACGGTAAGGTCcatagcaacacacacacaaatcatgcAATCGCACTAAAGCAGCCCTGCAGGGCCCCCTAGTGCTGCTGAATAgccactaaaatgaaaatgagcacacacacatacgcatgcATACCCATGCACTTCTTTGATATTTGACAggttgtgttttcttttactcTTTGCTGAATGCCTTCCAACACATTTGCTGACTGAGAGTTTTTAAGCTTATTCATAAGAATATGAACATCAGCGCAGTTTGTCTCACc

Function

NR:

description
PREDICTED: nidogen-2 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129272 True 341 lncRNA 0.42 1 11803287 11803627

Neighbor

gene id symbol gene type direction distance location
znf438 znf438,LOC107552762,LOC107706888,LOC107727313,LOC107582754 coding upstream 5672 11753401 ~ 11797615 (+)
arhgap12b arhgap12b,LOC107669490,LOC107552758,LOC107727310 coding upstream 125807 11634881 ~ 11677480 (+)
faap100 LOC107706879,LOC107669495,LOC107552754,LOC107727314,LOC107666926 coding upstream 195925 11602974 ~ 11607362 (+)
chad LOC107552753,LOC107727306,LOC107706882,LOC107698804,LOC107675646,LOC107582760 coding upstream 208745 11586050 ~ 11594542 (+)
armc7 armc7,LOC107706878,LOC107706863 coding upstream 221422 11580576 ~ 11581865 (+)
msl1b msl1b,LOC107706890,LOC107552764,LOC107669485,LOC107582751,LOC107666930,LOC107727293 coding downstream 11038 11814665 ~ 11820426 (+)
fbrs LOC107552766,LOC107706892,LOC107666918 coding downstream 20212 11823839 ~ 11835131 (+)
LOC122355327 LOC107669484,LOC107666914,LOC107727294,LOC107552729,LOC107706895 coding downstream 31646 11835273 ~ 11861572 (+)
ttll6 ttll6,LOC107582749,LOC107666932,LOC107727303,LOC107669465,LOC107706894,LOC107552736 coding downstream 59995 11863622 ~ 11871774 (+)
hoxb8b hoxb8b,LOC107669483,LOC107706868,LOC107552737,LOC107727302,LOC107666913 coding downstream 70022 11873649 ~ 11875679 (+)
G87341 NA non-coding upstream 2660 11800356 ~ 11800627 (+)
G87331 NA non-coding upstream 58882 11741981 ~ 11744405 (+)
G87282 LOC107552728,LOC107706876,LOC107700134,LOC107698791,LOC107582764,LOC107727319 non-coding upstream 262183 11473846 ~ 11541104 (+)
G87272 NA non-coding upstream 287291 11438405 ~ 11515996 (+)
G87285 NA non-coding upstream 306295 11484193 ~ 11496992 (+)
G87337 chmp2a,LOC106589279 non-coding downstream 18436 11822063 ~ 11823322 (+)
G87617 NA non-coding downstream 193663 11997290 ~ 11997512 (+)
G87621 NA non-coding downstream 263776 12067403 ~ 12067629 (+)
G87644 NA non-coding downstream 345796 12149423 ~ 12149637 (+)
LOC122355133 NA non-coding downstream 347525 12151152 ~ 12156922 (+)
G87315 zeb1b,LOC107666916,LOC107706887,LOC107727309,LOC107582755,LOC107552760,LOC107669492 other upstream 101632 11694844 ~ 11701655 (+)
svila LOC107686370,LOC107657481,LOC107584371,LOC107749370,LOC107549408 other upstream 1220742 10523143 ~ 10582545 (+)
LOC122355633 rhoq other upstream 1303589 10497425 ~ 10499698 (+)
LOC122355192 opn4b,LOC107552747,LOC107739286,LOC107568552,LOC107582762,LOC107700131 other upstream 1307010 10481492 ~ 10496277 (+)
LOC122355255 NA other upstream 1904286 9883033 ~ 9899001 (+)
hoxb6b hoxb6b,LOC107669478,LOC107706870,LOC107582852,LOC107552740,LOC107666911,LOC107727299 other downstream 78524 11882151 ~ 11884097 (+)
nbr1a nbr1,LOC107669491,LOC107706899,LOC107582742,LOC107727312,LOC107666919 other downstream 133214 11936841 ~ 11945635 (+)
G87817 NA other downstream 929137 12732764 ~ 12737649 (+)
gall si:rp71-1c10.8,LOC107677873,LOC107743798,LOC107675007,LOC107566084,LOC107754084,LOC107563807 other downstream 956747 12760374 ~ 12762731 (+)
G88016 NA other downstream 1638316 13441943 ~ 13444915 (+)

Expression


Co-expression Network