G1689


Basic Information

Item Value
gene id G1689
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 3241638 ~ 3241848 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU1905
AGAGTGCACGGCCTCCTTAGTGCCTTAACATAGGTGCTTTGTAGATCCTAGGATCGAGCAGATATACTCCCCTCGCTTGCAAGGGTCAATAGCACTTCGCTGAGTCCTGCTCTCCAGGATGCTCGTCTCTAAGATCCGGTCTGAGTTGGTCTACTGCCCTTTCTGCAGTCCCTCTTTCTGGATGTCTCTTCGTGAGACTTCTGTGTCTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1905 True 211 lncRNA 0.34 1 3241638 3241848

Neighbor

gene id symbol gene type direction distance location
CI01000000_03232984_03233709 NA coding upstream 7649 3232984 ~ 3233989 (+)
CI01000000_03220166_03232503 NA coding upstream 9135 3220166 ~ 3232503 (+)
CI01000000_03184726_03189468 FAF2 coding upstream 52170 3184680 ~ 3189468 (+)
CI01000000_03178021_03180730 NA coding upstream 60826 3178021 ~ 3180812 (+)
CI01000000_03163645_03170599 CLTB coding upstream 70627 3163157 ~ 3171011 (+)
CI01000000_03630643_03637287 LRRTM2 coding downstream 388743 3630591 ~ 3638076 (+)
CI01000000_03724666_03729920 MCHR2 coding downstream 482252 3724100 ~ 3730043 (+)
CI01000000_03864153_03869858 NA coding downstream 622305 3864137 ~ 3870246 (+)
CI01000000_03919871_03926839 NA coding downstream 676386 3918234 ~ 3926911 (+)
CI01000000_03930421_03932454 NA coding downstream 688573 3930421 ~ 3933213 (+)
G1683 NA non-coding upstream 28683 3211823 ~ 3212955 (+)
G1682 NA non-coding upstream 30202 3210830 ~ 3211436 (+)
G1515 NA non-coding upstream 92238 3124498 ~ 3149400 (+)
G1523 NA non-coding upstream 302610 2923688 ~ 2939028 (+)
G1661 NA non-coding upstream 362768 2878591 ~ 2878870 (+)
G1690 NA non-coding downstream 755 3242603 ~ 3242897 (+)
G1525 NA non-coding downstream 23881 3265729 ~ 3267405 (+)
G2124 NA non-coding downstream 83457 3325305 ~ 3325615 (+)
G2151 NA non-coding downstream 130567 3372415 ~ 3372830 (+)
G2161 NA non-coding downstream 146104 3387952 ~ 3388224 (+)
G579 NA other upstream 1332830 1767917 ~ 1908808 (+)
G435 NA other upstream 1808784 1425121 ~ 1432854 (+)
G350 NA other upstream 2564701 671842 ~ 676937 (+)
G252 NA other upstream 2734566 503209 ~ 507072 (+)
G2774 NA other downstream 1211930 4453778 ~ 4454232 (+)
G2850 NA other downstream 1484138 4725986 ~ 4726482 (+)
G6811 NA other downstream 6962983 10204831 ~ 10321679 (+)
G6820 NA other downstream 7185375 10427223 ~ 10433018 (+)
G7018 NA other downstream 7736641 10978489 ~ 10980872 (+)

Expression


Co-expression Network