G87414 (glud1b,LOC107700126,LOC107739271,LOC107582816)


Basic Information

Item Value
gene id G87414
gene name glud1b,LOC107700126,LOC107739271,LOC107582816
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 11316383 ~ 11318921 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU129367
caaaataaaatgaaataaatggtaacactttacaataaggttcattagttcaCATGAACTTAGAACGAAcgatacttctacagcatttattaatcgattaaatgttaatttcagcatttactaatgaattgcatccaaaataaaagtttgtctttatgtttacagtgtgtatttattatgaatatataaatacacatacacacagtatattatatatatataaattacatttatttagaaaatgtatctttaaCGTATACCTGTACgtgtttgtatattatattgtatatgcaTGAGTATATCAAACAGccctaataaataaacacacacacacacacacacacacaaggcaaAGAAGGCAGAACATGATGGACACTTACAGCTACACGAGCCTGGAAATCAGCAGTGGGGACAATTGGGATTGGGCCACCCTGCTTTCCAAACTTCCTTTCAAGACTTTCTTGTACAGACACtggacaaaacaaaagaaaaaaggttgatcatttatttaaatccaagtttctatacattttccatttcaaacTTTTTCAGACTCACATTTCCAAACCTCTCAATAGATTTTcagattatatttaacattaatggGTGATACAGCATTACTTTCAGCTTTAAATTCTGTATTGCAGTAAAGTCATctgcaatttttcttttctcaatttttcttttctgattttCTCTGAGTGACAGCATTCAGAGTccctaaaatataataataataataataataaaaatgcaaacatatgaatacacacaataatttttttgtgcctTCGAGAAACTATTAACATGCATATGGgatattttttgccattttatttttaaataacctatTTCCTTAGTGTGTCTCAGCCAACTTACTATCAATACAAAAAGAGCATGGATGCACATAAATCAAGAGATTTAAAGAGTTCAAAATTTGTTAAAAGGGGGCCGCAAATAGGTACCATcataatataatgaaatcaGTCAACTTTTATTCTGTCACACCGACACATCTCTTCAAAAGCAGCTTCATGACCCTGGTATCCATCCCATCTAATTACAGAAAATGACATTAACGGATCATTTCTTGAAGGGCCAGCGGGCTTTGACACTTGGGTGGTAATTAAATTGGTTTACCCGATGAGACAAAGAGAATCTGTGCCATGTGATCAAGTATAGCATATAGCACACAAAAGTAGGGGTGGTTCAAACTCTGCTTTAGGAAACAGTGTCACGCCCTGCCGGTCACAGCTATGGACCAAGCCTGCCTGAGTGCTAAGAATAAGTGCTAAAAGGGAGGGAGCGATGAAAAGAAAGGGAAtcaagaaaaactaaaacaaataggGTGTTACAGAGAACATTCTGAAGAGATAAAAATGCCTGCGGGCAGACAATagctttgaaaaatgtaatgaagCACGTCCATTGAGTTCATGCTGCTACTCTTTGAGTGACTGAGGCTGAAAGACCGGTTGGAAGAAATTTAAACACGTACTCAGCAGGTGGTAGTTGGAGTCTCTCTCGTACTTGAAGGTCAGACGACCGTAGCTGACGTGGTTCAGGTTCTTCAGCCACTCAAAGTAAGAGACTGTGACACCTCCAGCGTTCAGGTACATGTCCTGCGCATCGAGATATGAATCATTATTCCCATTTCAACTTTCCTGAAGCACAACAGAGTTAGAGATTATTGTTTTCTTACTGGAATGACCATGATGTTCCTTTCTAAGAAGATCTTGTCGGCATCTGGTGTAGTCGGACCATTAGCGCCTTCAGCAATCTTGGCTTTGATATTGTGGGCATTCTTCCTGGTCAGCTGTTTCTCTCCAGCTGCAGGGATGAGGATGTCACACTGAGCTTCCAGAATGTTCCCCTCATATGGTTGAGAGTTAGGGAAGCCCACAATGGTGCCATGTTGCTAAAGAGTAAGCAGAAACATCttgaaaaaaaagcttaaataagAATAGAAGGGCAAAAAAGTGATCGTAAAGGGACTTAACGGACCAGTTTGTAGTCCTCCAGCTCTTTGGGGTCCATGCCGTTGGGGTTCCAGATGCTGCCATCGATTTCAGCAATTCCCACACACTTGGCACCATAACGGTGGAGGTAACGCATGGAATGCAGACCCACATTACCGAAACCCTGGAAGATAGGATAAGAAACTAAAATAAGCATTGGTAAAAACAGAAtccagttttgtttgtttttgtgccaCTGGCGCCCCCGTGTGGTTTAAATGAGCATACACAAGCTATCGACGGGCAAAAACAAGCATCTTTGTCATAATTGCAGCAGAAATACTGGAAATAGCTTATACTGGAAAGCCTATTCGTCTTATCAAATGTATTTCTGGCATTTCATGTGCGTGTCAAAAGGGGAAATGCATATGGCTGATCACATTACGGAAGGGCAAATGGGAAGCCGTCGTATAGACTCAGTTCAACAGAAT

Function

symbol description
glud1b Predicted to enable glutamate dehydrogenase (NAD+) activity. Predicted to be involved in glutamate catabolic process. Predicted to act upstream of or within cellular amino acid metabolic process. Predicted to be active in mitochondrion. Is expressed in several structures, including blastomere; digestive system; fin; mesoderm; and tail bud. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 6; hyperinsulinism; hypoglycemia; and late onset Parkinson's disease. Orthologous to several human genes including GLUD1 (glutamate dehydrogenase 1).

NR:

description
glutamate dehydrogenase 1b

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129367 True 2449 lncRNA 0.38 2 11316383 11318921

Neighbor

gene id symbol gene type direction distance location
six2b LOC107749381,LOC107550038,LOC107698797,LOC107582772,LOC107700111,LOC107739330 coding downstream 96831 11217292 ~ 11219552 (-)
zfp36l2 zfp36l2,LOC107698819,LOC107749349,LOC107700120,LOC107550050,LOC107728722,LOC107582775 coding downstream 193545 11119418 ~ 11122838 (-)
hcar1-4 LOC107749353,LOC107698821,LOC107550036,LOC107700109,LOC107582776,LOC107728709 coding downstream 232347 11082205 ~ 11084036 (-)
kcng3 kcng3,LOC107749354,LOC107728707,LOC108273984,LOC107698800,LOC108430560 coding downstream 261577 11049679 ~ 11054806 (-)
rhoq rhoq,LOC107550049,LOC107582780 coding downstream 288953 11012472 ~ 11027430 (-)
sncgb LOC108430421,LOC107550059,LOC107700127 coding upstream 5480 11324401 ~ 11331793 (-)
bmpr1ab bmpr1a,bmpr1ab,LOC107749344,LOC107698810,LOC107550060,LOC107739296,LOC107582766,LOC108274296 coding upstream 25538 11344459 ~ 11374806 (-)
ldb3b ldb3b,ldb3,LOC107749342,LOC107552745,LOC107739309,LOC108274368,LOC107698793 coding upstream 56874 11375795 ~ 11392390 (-)
opn4b opn4b,LOC107552747,LOC107739286,LOC107582762 coding upstream 75336 11394257 ~ 11420206 (-)
usp54b LOC107698809,LOC107706875,LOC107720824,LOC107582762 coding upstream 121848 11440769 ~ 11528254 (-)
G87417 NA non-coding downstream 385 11312472 ~ 11315998 (-)
G87409 NA non-coding downstream 17849 11259017 ~ 11298534 (-)
G87484 NA non-coding downstream 32797 11278324 ~ 11283586 (-)
G87482 NA non-coding downstream 43081 11271741 ~ 11273302 (-)
G87449 NA non-coding downstream 151344 11108896 ~ 11165039 (-)
LOC122355534 NA non-coding upstream 260267 11579188 ~ 11580359 (-)
G87547 NA non-coding upstream 434128 11753049 ~ 11790926 (-)
G87551 NA non-coding upstream 480084 11799005 ~ 11799343 (-)
G87552 NA non-coding upstream 480671 11799592 ~ 11800481 (-)
G87593 NA non-coding upstream 572013 11890934 ~ 11894512 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other downstream 270494 11042888 ~ 11045889 (-)
cript cript,LOC107582781,LOC107728714 other downstream 309429 11005006 ~ 11006954 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other downstream 1376534 9311653 ~ 9939849 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other downstream 1827071 9481559 ~ 9489312 (-)
LOC122355288 LOC107660874 other downstream 2438252 8875617 ~ 8878131 (-)
G87489 NA other upstream 2502 11321423 ~ 11322603 (-)
G87569 NA other upstream 513958 11832879 ~ 11835612 (-)
G87608 NA other upstream 629619 11948540 ~ 11951155 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other upstream 1330462 12649383 ~ 12675472 (-)
G87845 LOC107675011 other upstream 1432983 12751904 ~ 12752678 (-)

Expression


Co-expression Network