G87489


Basic Information

Item Value
gene id G87489
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 11321423 ~ 11322603 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU129464
GCCATGCCCTGTTTACAGTACCAACACCACTTCTGAGGGGGTTCTTCGATGTCTTATTTTatcaatatattaatgtatttctaGCTTTCTTCGGATCTGGATTCTACCTTCCAGGCATGAGAAGAGAAACACAGGCATGAAAGAGAGAGGTGCATGAGTTTAAGTGGGTGTTTGTCATCCAAAGCTTTGGGGGAGTGTGTAAAAATGCTAAACAGCACAGACTATAAGTACTCACACCTCTGATGCACACACAGTTCCTGACTGACATCAGAGACGAAAACATGAACTTCATCAAGGGAGCAACGGACGGGCAGGTGGACAAGATGATCGATCAGGCCGCTGTTGTGGCCAAAGAGAAAGTCGGAGAAATAATGGGAGTAGACAAGAAAAAGGCAGGGGAAGCGAAAGGCCAGAAAGAGGGTGGAGGCATTGGCAATGTTTTGAGCGGTGCAATCGGCAAAGCTGCTTCAGACGCTGCAGCAAAAAGCGCCGCTGATCAGGTGGTGGACTATGGGAAGAACCTGCTCAAATAGGCCGACATACTTTGAACAGGAAATTTCTGTCATTACTGGATTCTAATACAATCTTGcggttttaaaactttttatggcAGCGCCAATGTTTTTCCAGAGGCTATATGTTGTCATCTTCAAACGGACGATGcctatatttctgttttctgcaCCTTTTGagatttatactttttttaagtatgATTTCAGAATGCATTTCAATGCCGTTTCTGTTATAACCAATAAAACTGATGCTTAACATGACGCAAATAAAGAACCAAAGAGCTGTTGTTTAGTGAGAGACTGATTTAGCTTTCAAGGCAAAGTTGCTGTTTgggttattttatttgacaacgtgtgaaattatttctgtaatacaTGTTTAAGAAATagaacacaaaacaacagaattaaaattcattacTAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129464 True 942 TUCP 0.41 3 11321423 11322603

Neighbor

gene id symbol gene type direction distance location
six2b LOC107749381,LOC107550038,LOC107698797,LOC107582772,LOC107700111,LOC107739330 coding downstream 101871 11217292 ~ 11219552 (-)
zfp36l2 zfp36l2,LOC107698819,LOC107749349,LOC107700120,LOC107550050,LOC107728722,LOC107582775 coding downstream 198585 11119418 ~ 11122838 (-)
hcar1-4 LOC107749353,LOC107698821,LOC107550036,LOC107700109,LOC107582776,LOC107728709 coding downstream 237387 11082205 ~ 11084036 (-)
kcng3 kcng3,LOC107749354,LOC107728707,LOC108273984,LOC107698800,LOC108430560 coding downstream 266617 11049679 ~ 11054806 (-)
rhoq rhoq,LOC107550049,LOC107582780 coding downstream 293993 11012472 ~ 11027430 (-)
sncgb LOC108430421,LOC107550059,LOC107700127 coding upstream 1798 11324401 ~ 11331793 (-)
bmpr1ab bmpr1a,bmpr1ab,LOC107749344,LOC107698810,LOC107550060,LOC107739296,LOC107582766,LOC108274296 coding upstream 21856 11344459 ~ 11374806 (-)
ldb3b ldb3b,ldb3,LOC107749342,LOC107552745,LOC107739309,LOC108274368,LOC107698793 coding upstream 53192 11375795 ~ 11392390 (-)
opn4b opn4b,LOC107552747,LOC107739286,LOC107582762 coding upstream 71654 11394257 ~ 11420206 (-)
usp54b LOC107698809,LOC107706875,LOC107720824,LOC107582762 coding upstream 118166 11440769 ~ 11528254 (-)
G87414 glud1b,LOC107700126,LOC107739271,LOC107582816 non-coding downstream 2502 11316383 ~ 11318921 (-)
G87417 NA non-coding downstream 5425 11312472 ~ 11315998 (-)
G87409 NA non-coding downstream 22889 11259017 ~ 11298534 (-)
G87484 NA non-coding downstream 37837 11278324 ~ 11283586 (-)
G87482 NA non-coding downstream 48121 11271741 ~ 11273302 (-)
LOC122355534 NA non-coding upstream 256585 11579188 ~ 11580359 (-)
G87547 NA non-coding upstream 430446 11753049 ~ 11790926 (-)
G87551 NA non-coding upstream 476402 11799005 ~ 11799343 (-)
G87552 NA non-coding upstream 476989 11799592 ~ 11800481 (-)
G87593 NA non-coding upstream 568331 11890934 ~ 11894512 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other downstream 275534 11042888 ~ 11045889 (-)
cript cript,LOC107582781,LOC107728714 other downstream 314469 11005006 ~ 11006954 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other downstream 1381574 9311653 ~ 9939849 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other downstream 1832111 9481559 ~ 9489312 (-)
LOC122355288 LOC107660874 other downstream 2443292 8875617 ~ 8878131 (-)
G87569 NA other upstream 510276 11832879 ~ 11835612 (-)
G87608 NA other upstream 625937 11948540 ~ 11951155 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other upstream 1326780 12649383 ~ 12675472 (-)
G87845 LOC107675011 other upstream 1429301 12751904 ~ 12752678 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other upstream 2101705 13424308 ~ 13432195 (-)

Expression


Co-expression Network