G87547


Basic Information

Item Value
gene id G87547
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 11753049 ~ 11790926 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU129560
tttattttttatttaggcaCCAATAATCAATAATGCAGGGAAGATTCTCTCTCTGTCGTACAAATGCTATTCAGGGCTTAGTTTATCTTAAGCCACAAACAGACACGTTTAACTATCACAGTGGCGGGGAAATCTTCAGAACTGGAAATGCTACAAGACACTTGTGTCATTTTACTGGCTTGTTTAGTGAAACCGATTCAAATGCTTTCCATGATTAAACAATCAATCACTTTGAATATAATAAGaccacattttaaacaaaatcattttttttttttttttttttttttttttttttttttttttttt

Function

GO: NA

KEGG:

id description
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU129560 True 309 lncRNA 0.29 2 11753049 11790926

Neighbor

gene id symbol gene type direction distance location
zeb1b zeb1b,LOC107706887,LOC107669492,LOC107552760,LOC107666916,LOC107582755,LOC107727309 coding downstream 11088 11685789 ~ 11741961 (-)
hexdc LOC107669475,LOC107706886,LOC107552734,LOC107727297,LOC107582853,LOC107666907 coding downstream 119166 11630324 ~ 11633883 (-)
kctd2 kctd2,LOC107666921,LOC107727321,LOC107582756,LOC107669473,LOC108410512 coding downstream 123161 11624098 ~ 11629888 (-)
slc16a5a slc16a5a,slc16a5,LOC107666920,LOC107669499,LOC107706881,LOC107582757,LOC107736668 coding downstream 132047 11612742 ~ 11621002 (-)
tap2t si:dkey-57h18.2,LOC107582758,LOC107727316,LOC107657063 coding downstream 140755 11607024 ~ 11612294 (-)
chmp2a bc2,chmp2a,LOC107552765,LOC107727322,LOC107582752,LOC106589279 coding upstream 29615 11820541 ~ 11823268 (-)
psme3 psme3,LOC107669474,LOC107582747,LOC107706898,LOC107727296,LOC107666924 coding upstream 141497 11932423 ~ 11936456 (-)
dhx8 dhx8,LOC107706906 coding upstream 312952 12103878 ~ 12112775 (-)
uts2r2 ogfod3,zgc:195081,LOC107743776,LOC107691211,LOC106959269 coding upstream 657110 12448036 ~ 12472207 (-)
psmd11b psmd11,psmd11b,LOC108426450,LOC107743775,LOC107568948,LOC107691212 coding upstream 681963 12472889 ~ 12480834 (-)
LOC122355534 NA non-coding downstream 172690 11579188 ~ 11580359 (-)
G87414 glud1b,LOC107700126,LOC107739271,LOC107582816 non-coding downstream 434128 11316383 ~ 11318921 (-)
G87417 NA non-coding downstream 437051 11312472 ~ 11315998 (-)
G87409 NA non-coding downstream 454515 11259017 ~ 11298534 (-)
G87551 NA non-coding upstream 8079 11799005 ~ 11799343 (-)
G87552 NA non-coding upstream 8666 11799592 ~ 11800481 (-)
G87593 NA non-coding upstream 100008 11890934 ~ 11894512 (-)
G87603 NA non-coding upstream 146115 11937041 ~ 11937682 (-)
G87605 NA non-coding upstream 153146 11944072 ~ 11945631 (-)
G87489 NA other downstream 430446 11321423 ~ 11322603 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other downstream 707160 11042888 ~ 11045889 (-)
cript cript,LOC107582781,LOC107728714 other downstream 746095 11005006 ~ 11006954 (-)
thrab thrab,LOC107584392,LOC107733455,LOC107657272,LOC108430158,LOC107665883,LOC107723634 other downstream 1813200 9311653 ~ 9939849 (-)
G87569 NA other upstream 41953 11832879 ~ 11835612 (-)
G87608 NA other upstream 157614 11948540 ~ 11951155 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other upstream 858457 12649383 ~ 12675472 (-)
G87845 LOC107675011 other upstream 960978 12751904 ~ 12752678 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other upstream 1633382 13424308 ~ 13432195 (-)

Expression


Co-expression Network