G1690


Basic Information

Item Value
gene id G1690
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 3242603 ~ 3242897 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU1906
TGTTTGGCCACAAAGATAGCTTTTTAAAGGGTTAGTTCAGCCTAAAATGAAAATTCTGTCATTAATTACTCACCTTCACCTCAAGACCTTCGTTCATCTTCAGAACACAAATTAAGATATTTTTGATGAAATCCAAGAGGTATATGACACATCCATAGACAGCAATATATTCACCACTTTCAAGGCCCAGAAAAGTACTAAAGACATAGTTAAAACAGTCGACGTGTCTGTAGTTGTTCAACCTTAATTTTATGAAGCGACGAGAATACATATTGCAAACAATACAAAAATACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1906 True 295 lncRNA 0.43 1 3242603 3242897

Neighbor

gene id symbol gene type direction distance location
CI01000000_03232984_03233709 NA coding upstream 8614 3232984 ~ 3233989 (+)
CI01000000_03220166_03232503 NA coding upstream 10100 3220166 ~ 3232503 (+)
CI01000000_03184726_03189468 FAF2 coding upstream 53135 3184680 ~ 3189468 (+)
CI01000000_03178021_03180730 NA coding upstream 61791 3178021 ~ 3180812 (+)
CI01000000_03163645_03170599 CLTB coding upstream 71592 3163157 ~ 3171011 (+)
CI01000000_03630643_03637287 LRRTM2 coding downstream 387694 3630591 ~ 3638076 (+)
CI01000000_03724666_03729920 MCHR2 coding downstream 481203 3724100 ~ 3730043 (+)
CI01000000_03864153_03869858 NA coding downstream 621256 3864137 ~ 3870246 (+)
CI01000000_03919871_03926839 NA coding downstream 675337 3918234 ~ 3926911 (+)
CI01000000_03930421_03932454 NA coding downstream 687524 3930421 ~ 3933213 (+)
G1689 NA non-coding upstream 755 3241638 ~ 3241848 (+)
G1683 NA non-coding upstream 29648 3211823 ~ 3212955 (+)
G1682 NA non-coding upstream 31167 3210830 ~ 3211436 (+)
G1515 NA non-coding upstream 93203 3124498 ~ 3149400 (+)
G1523 NA non-coding upstream 303575 2923688 ~ 2939028 (+)
G1525 NA non-coding downstream 22832 3265729 ~ 3267405 (+)
G2124 NA non-coding downstream 82408 3325305 ~ 3325615 (+)
G2151 NA non-coding downstream 129518 3372415 ~ 3372830 (+)
G2161 NA non-coding downstream 145055 3387952 ~ 3388224 (+)
G2167 NA non-coding downstream 153109 3396006 ~ 3396231 (+)
G579 NA other upstream 1333795 1767917 ~ 1908808 (+)
G435 NA other upstream 1809749 1425121 ~ 1432854 (+)
G350 NA other upstream 2565666 671842 ~ 676937 (+)
G252 NA other upstream 2735531 503209 ~ 507072 (+)
G2774 NA other downstream 1210881 4453778 ~ 4454232 (+)
G2850 NA other downstream 1483089 4725986 ~ 4726482 (+)
G6811 NA other downstream 6961934 10204831 ~ 10321679 (+)
G6820 NA other downstream 7184326 10427223 ~ 10433018 (+)
G7018 NA other downstream 7735592 10978489 ~ 10980872 (+)

Expression


Co-expression Network