G87607


Basic Information

Item Value
gene id G87607
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 11946907 ~ 11947734 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU129635
CGTGATCACCATTTTAACGCTATCTGGAGTGAAATAGACCATAGATGACTTTAGTTCTACAGATGACATATCCATACTCCGTGGGAAGAGGAAAAACAGGATCAGGGAGCAGATCAAAAGGCAAAGCCCCactgatataaacacatacagtttCCTGAAGCACATAAAACCACGTTGTACATCACTTTGAAAAAACTGACATTACAAAGCACATTTCATCGCTGAAACTAAAAATTGCAGAAGTATAGTCTACTTGTCATAGTGATACTGACGTGTGGTGAGGTTTCAGCCTTTGGTCGCTGCAAGGAATAACTGCCACAAGTTGGTTTTCCTGACCTGAGGATGTTAAGATGGGCAGAATAAGGaatcaCTGAAACCTGCCTCTCGGGATGCGTCCTGTGCCCTGACAGGTAGGACATGGCTCTGTCTGTCCTTCTCCATTGATGCTGCCATAGTCCAGCCATTTGGAAAGCCTCCGCTTCTCTCCATTTTTATCCTTGGACATAATGTTGTTTTTCCAGGAAACGAAGGGTCCGAACTAAAGACTTCTACAATAAACAGTAAGAGAGCTTCGCTAAGGTTCATCTGTTGTAGGTGCGTAGCTGCAAAGAAAGTCTTTCACTTAAAAGTTAGGGTGAAAACGATTGCATTGTTCTAGTTATACATTACAGTAATTAACCACACCATCTCTACAACATCCACTGTAGGTCATATTGTAAAACGGCCC

Function

GO:

id name namespace
GO:0005768 endosome cellular_component
GO:0044433 obsolete cytoplasmic vesicle part cellular_component
GO:0044440 obsolete endosomal part cellular_component
GO:0010008 endosome membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129635 True 727 lncRNA 0.42 2 11946907 11947734

Neighbor

gene id symbol gene type direction distance location
psme3 psme3,LOC107669474,LOC107582747,LOC107706898,LOC107727296,LOC107666924 coding downstream 10451 11932423 ~ 11936456 (-)
chmp2a bc2,chmp2a,LOC107552765,LOC107727322,LOC107582752,LOC106589279 coding downstream 123639 11820541 ~ 11823268 (-)
zeb1b zeb1b,LOC107706887,LOC107669492,LOC107552760,LOC107666916,LOC107582755,LOC107727309 coding downstream 204946 11685789 ~ 11741961 (-)
hexdc LOC107669475,LOC107706886,LOC107552734,LOC107727297,LOC107582853,LOC107666907 coding downstream 313024 11630324 ~ 11633883 (-)
kctd2 kctd2,LOC107666921,LOC107727321,LOC107582756,LOC107669473,LOC108410512 coding downstream 317019 11624098 ~ 11629888 (-)
dhx8 dhx8,LOC107706906 coding upstream 156144 12103878 ~ 12112775 (-)
uts2r2 ogfod3,zgc:195081,LOC107743776,LOC107691211,LOC106959269 coding upstream 500302 12448036 ~ 12472207 (-)
psmd11b psmd11,psmd11b,LOC108426450,LOC107743775,LOC107568948,LOC107691212 coding upstream 525155 12472889 ~ 12480834 (-)
myo1d myo1d,si:ch211-94l19.4,LOC107743773,LOC107677861,LOC107675020 coding upstream 541035 12488769 ~ 12548929 (-)
LOC122355678 LOC107675002,LOC107754109,LOC107566636 coding upstream 601922 12549656 ~ 12552715 (-)
G87605 NA non-coding downstream 1276 11944072 ~ 11945631 (-)
G87603 NA non-coding downstream 9225 11937041 ~ 11937682 (-)
G87593 NA non-coding downstream 52395 11890934 ~ 11894512 (-)
G87552 NA non-coding downstream 146426 11799592 ~ 11800481 (-)
G87551 NA non-coding downstream 147564 11799005 ~ 11799343 (-)
G87610 NA non-coding upstream 22795 11970529 ~ 11970824 (-)
G87659 NA non-coding upstream 203565 12151299 ~ 12151635 (-)
G87660 NA non-coding upstream 204506 12152240 ~ 12152737 (-)
G87695 LOC107669482,LOC107552775 non-coding upstream 397164 12344898 ~ 12347066 (-)
G87746 NA non-coding upstream 491016 12438750 ~ 12487395 (-)
G87569 NA other downstream 111295 11832879 ~ 11835612 (-)
G87489 NA other downstream 624304 11321423 ~ 11322603 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other downstream 901018 11042888 ~ 11045889 (-)
cript cript,LOC107582781,LOC107728714 other downstream 939953 11005006 ~ 11006954 (-)
ormdl3 ormdl3,LOC107723636,LOC107657273,LOC107556587,LOC108273759,LOC102217224,LOC106521946,LOC102783025,LOC105936292,LOC107092838 other downstream 2457595 9481559 ~ 9489312 (-)
G87608 NA other upstream 806 11948540 ~ 11951155 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other upstream 701649 12649383 ~ 12675472 (-)
G87845 LOC107675011 other upstream 804170 12751904 ~ 12752678 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other upstream 1476574 13424308 ~ 13432195 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other upstream 1575934 13523668 ~ 13540301 (-)

Expression


Co-expression Network