G87644


Basic Information

Item Value
gene id G87644
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 12149423 ~ 12149637 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU129688
AGAACCCAGATGCACTGCACCTTATTTCCAAGCAGAGGAGTGCACAAAGAACAGCGCTTATCTTAAATAGAAAAGACCCGctaaagtgcttttaaaaaacacagagcGTCATTTTATGTATTGACGTAATTGTAACTGAAACAGGAAGACAGAAAGTTTGATGAGAAGCGCAGGATGATGTCATCAAAAAAGCTGATCCATATTTGCAGAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129688 True 215 lncRNA 0.39 1 12149423 12149637

Neighbor

gene id symbol gene type direction distance location
spata20 spata20 coding upstream 1556 12113257 ~ 12147867 (+)
etv4 etv4,LOC107552771,LOC107706904 coding upstream 46720 12080097 ~ 12102703 (+)
meox1 meox1,LOC107706874,LOC107669480,LOC107666908,LOC107743797 coding upstream 98420 12045523 ~ 12051003 (+)
sost LOC107552770,LOC107706903,LOC107582741,LOC107743777 coding upstream 155795 11989281 ~ 11993628 (+)
dusp3a dusp3a,dusp3,LOC107669488,LOC107552769,LOC107666929,LOC107582744 coding upstream 167429 11971695 ~ 11981994 (+)
cacna1g cacna1g,LOC107754113,LOC107552774 coding downstream 15952 12165589 ~ 12352484 (+)
LOC122355068 uts2r,LOC107552777,LOC107754100,LOC107689263,LOC107577513,LOC107743796,LOC107691210 coding downstream 222791 12372428 ~ 12402861 (+)
LOC122355615 LOC107754112,LOC107689267,LOC107743783,LOC107566616,LOC107691214,LOC107568947 coding downstream 302357 12451994 ~ 12457855 (+)
cdk5r1b cdk5r1b,cdk5r1,LOC107568950,LOC107565647,LOC107754098,LOC107675021,LOC107691215,LOC108426451 coding downstream 332415 12482052 ~ 12487183 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 coding downstream 417444 12567081 ~ 12607101 (+)
G87621 NA non-coding upstream 81794 12067403 ~ 12067629 (+)
G87617 NA non-coding upstream 151911 11997290 ~ 11997512 (+)
G87337 chmp2a,LOC106589279 non-coding upstream 326101 11822063 ~ 11823322 (+)
G87343 NA non-coding upstream 345796 11803287 ~ 11803627 (+)
G87341 NA non-coding upstream 348796 11800356 ~ 11800627 (+)
LOC122355133 NA non-coding downstream 1515 12151152 ~ 12156922 (+)
G87664 NA non-coding downstream 7949 12157586 ~ 12157815 (+)
G87665 NA non-coding downstream 8609 12158246 ~ 12158508 (+)
G87669 NA non-coding downstream 90146 12239783 ~ 12240201 (+)
G87718 NA non-coding downstream 327168 12476805 ~ 12477909 (+)
nbr1a nbr1,LOC107669491,LOC107706899,LOC107582742,LOC107727312,LOC107666919 other upstream 203788 11936841 ~ 11945635 (+)
hoxb6b hoxb6b,LOC107669478,LOC107706870,LOC107582852,LOC107552740,LOC107666911,LOC107727299 other upstream 265326 11882151 ~ 11884097 (+)
G87315 zeb1b,LOC107666916,LOC107706887,LOC107727309,LOC107582755,LOC107552760,LOC107669492 other upstream 447768 11694844 ~ 11701655 (+)
svila LOC107686370,LOC107657481,LOC107584371,LOC107749370,LOC107549408 other upstream 1566878 10523143 ~ 10582545 (+)
LOC122355633 rhoq other upstream 1649725 10497425 ~ 10499698 (+)
G87817 NA other downstream 583127 12732764 ~ 12737649 (+)
gall si:rp71-1c10.8,LOC107677873,LOC107743798,LOC107675007,LOC107566084,LOC107754084,LOC107563807 other downstream 610737 12760374 ~ 12762731 (+)
G88016 NA other downstream 1292306 13441943 ~ 13444915 (+)
G88082 NA other downstream 1446157 13595794 ~ 13596348 (+)
gucy2g gucy2g,LOC107702423,LOC107755438,LOC107722192,LOC107581632,LOC107684125,LOC107571103,LOC108273537 other downstream 1706058 13855695 ~ 13864743 (+)

Expression


Co-expression Network