G87746


Basic Information

Item Value
gene id G87746
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 12438750 ~ 12487395 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU129849
AACCCCTCCCTCCCACCCGCCTGTCAAACTCTAGCCCGATACTATAGAGTCCTACCCTCTAATAAGCACGGCCATGCTCTGATCCTAGAAAATCAACTTACACACATCACGCTCCTCTATACAAATACACTCGTTCGCACTCGCGCGCTCATGCAATCCTTTTTTTGTAACACTGTTATCAGTTCTACAATGAATTACGCAACAGATACAGAGAGAGTTTGACAGGAGTTTAATCTTTTACTtagcatgtttttgtttcaaaggACTACTCTGTGATGCAAGTGAAAAAATGGCACATTGTTGTGGGCTGGGGGCAAATAATAGCAGGCAAGCGGTGAAGAAGGGCTCACCTACTTCAGCCCCCACAACCTCAAACCCCTGCGGTCTCCTCAGACGAATCGCTCACAGAAAAGTGCAAGTCCTGTATCCAGACCTCCCCtggcacgtttttttttttttagcaaatcatTGGCTTCTTCCACCTTTTAGTCACTTAAAGCAATGCAGCAGGGCAAGCAGTCACACAGAATCCATCCATCCCACTTTCATATCATGAGAAGAACAGGCTTTTGCATGAATTAACAGAGACGTAATAATGTTTGCTTACATGACGgtcacattctttttttcttttttttttgactacaAAGAAAGAGATACATAATTACTGAAAGAAAGCATGCACAATTTAGCACTGTTGAGATGTTTTAAAGCGAGCAAATAGATCATACAATGCGCATTTCCCCCCCCCATAACCCAGATCCAGTTTGATTGATGTCATCGATGTGGCTGCAAACGTACGTTTTCAATATCGTCTGGTACTTGAAAACCATTCCTCTATGTAAATGTGATCGAAATCTCCAGAAATAGACCACATCTCATCCGGTTTAATGCCTGGAGCTTGTTATCATCTGTGTTGTCATGGGTTAATCACTCATGATTGCTTTTGCGGTGCTGATATGTAGAACATCCCAACAGTACTTCACAGAGAAATTGGTTTCAGGTACTTCATTTTGATTGAAACCGATCGTCTGTCACTATGATGAATTACCTCGGTGTATCTCAGATCTGAAAATGGTCTAAAACTAAGCTCTTATAGACATTACTGtcttaaataattcatttgaatgCAAATGTGCATTAACCATAATCTTCATTCCCACCAGAAGGTAGCCATCGATCTAAATgctgcccttttttttttttttttttttttttttttttttaacaacacgTTACTAAAATCTCTAAATGCAAGAGAGAAGTgtgtgaaaataattaataaataacaataaattacgATTCCCATAGATACTTATTAATGACAATCCTACCGTTCCAAAGTTTGCCGGCCTTTGGTATGTTTTTAGACCTACATGATTTTCATCAAAGGTATGGCACtgttttttgatacatttacagGCTTTTCTGTACAGAGCCCCCTGTTGAAACTAGTCTCgagtacaaaacaaaatgacaaaacaatggCTCATTGAAGCAGGCATAGCAAGATAAACTATTTTAACTAGTTCTTTTTTTGTCGTATTTCATTCCCTAAACACATATGCAGTCagcttagaaaaaaaacaacaacaaaaaaaactcaaagtaCATCATCCGGCTTGTGTGTGCATTCAGATGAAtacagttgtttaaaaaaaaggacgTAAACCACGGGAGAGAACCGTTTAACTCTGTATCATGGATGAAAATAAAGTAGGTCTTTCTTACAAATGTGCTGACAACCTCTCCTTTCACCATCTACATCAACAGCCACTGTGCAATGCTGGCCTCAAAGTCATTTCCCTTTATTCTTTGTGAGTGTCCTGCGAACATAAACACGCTCAACCTGGCGCCCCTCTTCCCTTTTTGCGATTGGCTGTAACAGAATTTGCAACAGTAAGGTGTTTAGCATTCAGTGAGTGTCCTGTTTCATGGACACAGGAGAACAAGTGTCTGTTGATTATGAATCAGTCTCCGTTTCTATTGACAGCGGTGGAAAGGATCTTGGTGCAAAGTGTCCAGAAGTCAGCTTGACAACAGCTGGATTCCTGTCCACATTCAAagttgtgttcttttttttttttttttttttttttttttttttttttttttttttttttttttttttac

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
TU129849 True 2133 lncRNA 0.39 2 12438750 12487395

Neighbor

gene id symbol gene type direction distance location
dhx8 dhx8,LOC107706906 coding downstream 325975 12103878 ~ 12112775 (-)
psme3 psme3,LOC107669474,LOC107582747,LOC107706898,LOC107727296,LOC107666924 coding downstream 502294 11932423 ~ 11936456 (-)
chmp2a bc2,chmp2a,LOC107552765,LOC107727322,LOC107582752,LOC106589279 coding downstream 615482 11820541 ~ 11823268 (-)
zeb1b zeb1b,LOC107706887,LOC107669492,LOC107552760,LOC107666916,LOC107582755,LOC107727309 coding downstream 696789 11685789 ~ 11741961 (-)
hexdc LOC107669475,LOC107706886,LOC107552734,LOC107727297,LOC107582853,LOC107666907 coding downstream 804867 11630324 ~ 11633883 (-)
myo1d myo1d,si:ch211-94l19.4,LOC107743773,LOC107677861,LOC107675020 coding upstream 1374 12488769 ~ 12548929 (-)
LOC122355678 LOC107675002,LOC107754109,LOC107566636 coding upstream 62261 12549656 ~ 12552715 (-)
pdk2a LOC107754097,LOC107565668,LOC107568951,LOC107677886,LOC107743772,LOC103046317,LOC108426453 coding upstream 69287 12556682 ~ 12564039 (-)
osbpl7 osbpl7,LOC107565688,LOC107677882,LOC107743767,LOC107754093 coding upstream 166605 12654000 ~ 12665037 (-)
mrpl10 mrpl10,LOC107566794,LOC107754119 coding upstream 178720 12666115 ~ 12667979 (-)
G87695 LOC107669482,LOC107552775 non-coding downstream 91684 12344898 ~ 12347066 (-)
G87660 NA non-coding downstream 286013 12152240 ~ 12152737 (-)
G87659 NA non-coding downstream 287115 12151299 ~ 12151635 (-)
G87610 NA non-coding downstream 467926 11970529 ~ 11970824 (-)
G87607 NA non-coding downstream 491016 11946907 ~ 11947734 (-)
LOC122355629 NA non-coding upstream 125755 12613150 ~ 12638736 (-)
G87860 gabrz,LOC108273489,LOC107675029,LOC107754081,LOC107565977 non-coding upstream 317301 12804696 ~ 12807646 (-)
G88003 NA non-coding upstream 878558 13365953 ~ 13368320 (-)
G88019 NA non-coding upstream 946499 13433894 ~ 13434125 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding upstream 971061 13458456 ~ 13459865 (-)
G87608 NA other downstream 487595 11948540 ~ 11951155 (-)
G87569 NA other downstream 603138 11832879 ~ 11835612 (-)
G87489 NA other downstream 1116147 11321423 ~ 11322603 (-)
LOC122355648 cox7a3,LOC107550034,LOC107582778,LOC107749383,LOC107728726,LOC108429329,LOC108273985,LOC107700119 other downstream 1392861 11042888 ~ 11045889 (-)
cript cript,LOC107582781,LOC107728714 other downstream 1431796 11005006 ~ 11006954 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other upstream 161988 12649383 ~ 12675472 (-)
G87845 LOC107675011 other upstream 264509 12751904 ~ 12752678 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other upstream 936913 13424308 ~ 13432195 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other upstream 1036273 13523668 ~ 13540301 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other upstream 1122025 13609420 ~ 13691340 (-)

Expression


Co-expression Network