G87817


Basic Information

Item Value
gene id G87817
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 12732764 ~ 12737649 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU129954
AGTTTGGGGTGGGTCATTCACACGCGCTGCTTTTGCTATGCTTGAAACCCATTTGCGGCTTTTAATCTTTTGAAATCGCCGTGGGAtttcaatacatatatatatagagctcAATGGATTCCGGTGCTGTGTTGCGTTGCCTCTATTGGATTACTCTATTGATCGCCACGCTTATTCACGGAATAAACGCGGACAAAATTTCTTCAGGTTCAGCCCTTTGTTTGAAATCCGAATTCTGGAACAGAGACGTCGCACAATGCGTTCCTTGTCATATATGCAAACAGTATCCGAAAACTCCATCGTGTGACACATGCCCACCCATAGAGCCTTCGGATTCCTGGAGGGTGGCAGCAATTACCAGTTTATCTGTCCTGGCAGGCGTAATTGTTTGCGGAGCCTTGCTCATAGGCATTCTAGTACATCAATGCAGGTCCAAGAGGACTTTACGTGACCCAATTGAAGAGACAACAGGACCCCTTTATCCAGTTTAGGATCTTCGTAAGCTCATGAAACTCAAGCTGACGAAAATGAATATGGACTGTTACTCCAGTGAACTAATGCTCCAGTTGGTTAACACTGGCTGGTACCTCAACCACAGAGTGTTCTATGAGTAGCATCTGATTTGTCTAATTTATTACATTAGTAGGCTATGTCATGCATAGCAAATGGTTATGCACAAAAGCTGCACTGAGACCCTCCTTGTCACTCACTGTGCAGAATAGGTTTGCAAGCCTTAGGTGCTAAGTGACATCCTATGGACAGCATGatagcatatattatatattcctTTTTTTGGAACCCTTAAATTGCTTTTGTGACGGGTCTTGTTATACTGTTTTTACAGACATTTGAGGCCATTCATGTTGCACTTAAGAGTGCACTGTAGATGCATTCCCACTTGAACATTCCTTGTTAGATTTGTGaacatgacaaacaaataaCCACAAACAGTTTAATATAGCCGACGTAgagctaaacttttttttacacaaatatgcCTCCCTAAACAGATTTAGTATGCACAGCcatttgaatgtatttgtaATCATTGTTTGTACAGTTGaattatctatttttatagTGTTGGAATACTACGCACTGTATAGATGTAGCCCTTTTGTACAACAATGTTGTGACACCGACTGGCTCAGCAGCCTGTCTATGGCATTGATGAACATTCTGGAGACACTGAAGACCAGCGAAGCAACAGAAGCCGATATCCTGAAAGACAAGAGCCGCCAGCTGACGTTAACAGATTCTCTGAGAAAGAGTCGCAGGTGTCAGATTCCATCTTAGTTTTGTTGCCTTTATATGCATAAGAGATTAGATAGTTTAGAGTGATATTTACGTACATGTATCCCAGTACATTTAATCTCtcgtattttatcatttcaacttgctaaaatattttgaaaggatAAAATCGCCAGTTTTAGATGTGTGTAGCCAGCTATGGGCATTAGGaaaacgtatatatttatatacagcagATGCTAAGGAGTAGTTAACTTGTTTGAATGACTTAAAGCATGTTTAGCAAGAGGGTAATCTCATGAAACATGTGAAACACGGTAACATCAACCCAGAATCataagaaagaaattatattttgcttaaagAAATTGTTGCATTGTTTTCAAGAAGCACATTTTATACCCCAGTTTCCAAGAATACTTCATGTACCTCATTGTGTATCACTGCCATGTTTGTCAGAAATCTAGGAACATCAAGAAGCTAGTCCAGAACCTTGATGAACATAAACCTGTGAAGCATGCACGGCGCTGTCACAGTCTTGAGTAAAGTTGGTTGTGTATTTGTGCCTTACTCATTCGTAATTACTCCACAGACTGCAGAGGAAACTatgcatttcaataaaataaagagacaACTAACGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129954 True 1896 TUCP 0.40 5 12732764 12737649

Neighbor

gene id symbol gene type direction distance location
rnf40 LOC107754088,LOC107675023,LOC107743762,LOC107565773,LOC107677883,LOC107563784 coding upstream 1836 12717290 ~ 12730928 (+)
phkg2 phkg2,LOC107743765,LOC107675026,LOC107563781,LOC107566018 coding upstream 18092 12709411 ~ 12714672 (+)
nfe2l1b nfe2l1,nfe2l1b,LOC107565927,LOC107754105,LOC107743763,LOC107563780,LOC107677875 coding upstream 35525 12691518 ~ 12697239 (+)
cdk5rap3 cdk5rap3,LOC107754106 coding upstream 49147 12677700 ~ 12683617 (+)
pnpo pnpo,LOC107743793,LOC107754092,LOC107563779,LOC107677888,LOC107565739 coding upstream 60825 12668222 ~ 12671939 (+)
znf668 znf668,LOC107675019,LOC107754087,LOC107743759,LOC107563787,LOC108426467 coding downstream 8902 12746551 ~ 12750006 (+)
gjz1 si:rp71-1c10.10,LOC107675010,LOC107563802,LOC107754116,LOC107677869,LOC107743778 coding downstream 12977 12750626 ~ 12751732 (+)
valopb valopb,LOC107566010,LOC107754082,LOC107743790,LOC107677889,LOC107675006,LOC107563788,LOC108426422 coding downstream 28476 12766125 ~ 12773695 (+)
gabrz gabrz,LOC107675029,LOC107677887,LOC107743757,LOC107754081,LOC107565977,LOC107563789,LOC108426470 coding downstream 53640 12791289 ~ 12812984 (+)
adgra1a adgra1a,LOC107754080,LOC107675035,LOC107565950,LOC107693584,LOC107563791,LOC108426471 coding downstream 77542 12815191 ~ 12841965 (+)
G87753 NA non-coding upstream 174032 12556682 ~ 12558732 (+)
G87718 NA non-coding upstream 254855 12476805 ~ 12477909 (+)
G87669 NA non-coding upstream 492563 12239783 ~ 12240201 (+)
G87665 NA non-coding upstream 574256 12158246 ~ 12158508 (+)
G87664 NA non-coding upstream 574949 12157586 ~ 12157815 (+)
G87891 NA non-coding downstream 162423 12900072 ~ 12900399 (+)
G87934 NA non-coding downstream 458335 13195984 ~ 13197074 (+)
G87979 LOC107755539,LOC107566694,LOC107702418,LOC107708141,LOC107689963 non-coding downstream 611300 13348949 ~ 13383848 (+)
G87981 NA non-coding downstream 622665 13360314 ~ 13361050 (+)
G88010 NA non-coding downstream 691764 13429413 ~ 13431559 (+)
nbr1a nbr1,LOC107669491,LOC107706899,LOC107582742,LOC107727312,LOC107666919 other upstream 787129 11936841 ~ 11945635 (+)
hoxb6b hoxb6b,LOC107669478,LOC107706870,LOC107582852,LOC107552740,LOC107666911,LOC107727299 other upstream 848667 11882151 ~ 11884097 (+)
G87315 zeb1b,LOC107666916,LOC107706887,LOC107727309,LOC107582755,LOC107552760,LOC107669492 other upstream 1031109 11694844 ~ 11701655 (+)
svila LOC107686370,LOC107657481,LOC107584371,LOC107749370,LOC107549408 other upstream 2150219 10523143 ~ 10582545 (+)
LOC122355633 rhoq other upstream 2233066 10497425 ~ 10499698 (+)
gall si:rp71-1c10.8,LOC107677873,LOC107743798,LOC107675007,LOC107566084,LOC107754084,LOC107563807 other downstream 22725 12760374 ~ 12762731 (+)
G88016 NA other downstream 704294 13441943 ~ 13444915 (+)
G88082 NA other downstream 858145 13595794 ~ 13596348 (+)
gucy2g gucy2g,LOC107702423,LOC107755438,LOC107722192,LOC107581632,LOC107684125,LOC107571103,LOC108273537 other downstream 1118046 13855695 ~ 13864743 (+)
LOC122355339 LOC107702424 other downstream 1156712 13894361 ~ 13904627 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G266165 NA non-coding CI01000063 null 7443051 ~ 7446972 (+)
rainbow trout (Oncorhynchus mykiss) G265810 NA non-coding NC_048567.1 CM023221.2 47927887 ~ 47928190 (+)