XLOC_006645


Basic Information

Item Value
gene id XLOC_006645
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 26533354 ~ 26544816 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013801
CTGAGCCTTTGAGCACATGCTTTATAGGATGCATGTATTTGTTGTGCAGAGAGGTTTTCTAGGGGATTATCGTGGCCTAAATCTCTGTGGTCCTGTGATGTTCAAGAACTTTGAAACTTTAGTGGATCTACTGTACATGCACAAAGGTGGTTTATTCTTGGCCAGATTCCCATGTTGCACTGTATCAGTGTGCAGGTTTCTTACTCCCAACGATTTTGACAAAGCTCAATGCACCCTCAACCCCACGTTCTTCACAATACTCAAAACCATGGATATTTCATATTGCAGCTTTACATCCTCTTTCTCTAACTTTCTCCATCTCCGTACAATAAGATCTTTACCCAGAGAGCTTCGTTGCATCCCTGGAGCCCAGAGCAGAAACAATATAAGCCTGAAGTACAGAAGGTCAGAATACTGATGCTGATTTACCTACTGTACAAAGTAGGGAGGGAAAAGTCTTCATCTGCAGGTGGTATGATCTATCGTATGTCCATTCGCCCAGACCTTGGCCCTAAATTCAACCCCATCTGCGCTGAAGAGGTTAAACTGGCAGGAGCGTTCAGAGACACAACTGGACGGCTTTAGTGCATTTTGTTGTAATTGTGTCCCAGTTGTCTTGTCAGAAATCAATTCAAGTTTGGAGGTGGCTTGCACAGGGAGGTCAAGGATTCTGCAGCCTAAATATTTTATCTGTATTACACGTCTGGAGCTTTTAAAGATGCGCACTGGCCTGTTTTCCCCCATTTCTCTGAAGCAGACGCTATCGGACCAGTCTTTCCGCCCAGGTCAGGGCTGGGTTAGAATCAATTATAATCAATTATTAAGAGTACTGTGTATCTGGTGGAGGTTGAAGGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013801 True 855 lncRNA 0.44 3 26533354 26544816

Neighbor

gene id symbol gene type direction distance location
XLOC_006643 NA coding downstream 680043 25846532 ~ 25853311 (-)
XLOC_006642 papolg coding downstream 691280 25824345 ~ 25842074 (-)
XLOC_006641 rel coding downstream 713529 25795511 ~ 25819825 (-)
XLOC_006640 NA coding downstream 754539 25776389 ~ 25778815 (-)
XLOC_006639 pdlim1 coding downstream 759171 25762908 ~ 25774183 (-)
XLOC_006646 AL627132.1 coding upstream 22250 26567066 ~ 26567184 (-)
XLOC_006647 vrk2 coding upstream 235188 26780004 ~ 26799244 (-)
XLOC_006648 ccdc85a coding upstream 455578 27000394 ~ 27038407 (-)
XLOC_006649 NA coding upstream 682545 27227361 ~ 27227750 (-)
XLOC_006650 NA coding upstream 726522 27271338 ~ 27277709 (-)
XLOC_006471 BX537274.2 misc downstream 16268449 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 25707129 825904 ~ 826225 (-)
XLOC_006633 BX005252.1 non-coding downstream 1002706 25530534 ~ 25530648 (-)
XLOC_006629 NA non-coding downstream 1248638 25210158 ~ 25284716 (-)
XLOC_006620 AL831745.2 non-coding downstream 1926727 24602410 ~ 24606627 (-)
XLOC_006654 CR356236.2 non-coding upstream 1145344 27690160 ~ 27690276 (-)
XLOC_006655 NA non-coding upstream 1256599 27801415 ~ 27816641 (-)

Expression


Co-expression Network