G87891


Basic Information

Item Value
gene id G87891
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 12900072 ~ 12900399 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU130050
CAGGACTCTGAGTCTTTGTGCATTACATCAGTGTTTTCATGGCTTCCTCCCATCGGAGCAAAGATTGACTTGAGATTGAATATTAAGCTGGTGGATGAACACATGTAATGTTCTCACAAAATGAAAGGATAACCCGTTATGAGTTTCAAAGCCAATGGCTCACGCTAGATCTGCGGAGAGACACGGTGCACGAGagcaaaacaaatatgtttgtctgcaaattaattaaaaaaattgccaaATGTTGCTTCTGTGGTGCTCAGTTGGAAGAAATTGTTGGCGCAGCCTGCCAGCGGttgcgttttattttttcttatttggaTTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130050 True 328 lncRNA 0.41 1 12900072 12900399

Neighbor

gene id symbol gene type direction distance location
bms1 bms1,LOC107675025,LOC107689949,LOC107566656 coding upstream 22804 12860134 ~ 12877268 (+)
mxtx2 mxtx2,LOC107566646,LOC107675004,LOC107754102,LOC107722443,LOC107563796 coding upstream 40544 12858248 ~ 12859528 (+)
adgra1a adgra1a,LOC107754080,LOC107675035,LOC107565950,LOC107693584,LOC107563791,LOC108426471 coding upstream 58107 12815191 ~ 12841965 (+)
gabrz gabrz,LOC107675029,LOC107677887,LOC107743757,LOC107754081,LOC107565977,LOC107563789,LOC108426470 coding upstream 87088 12791289 ~ 12812984 (+)
valopb valopb,LOC107566010,LOC107754082,LOC107743790,LOC107677889,LOC107675006,LOC107563788,LOC108426422 coding upstream 126377 12766125 ~ 12773695 (+)
gfra1b gfra1b,LOC107755550,LOC107702444,LOC107581544,LOC107689950,LOC107707958 coding downstream 181774 13082173 ~ 13107311 (+)
ablim1b ablim1b,ablim1,LOC107565789,LOC107689952,LOC107581547,LOC107755543 coding downstream 303383 13203782 ~ 13268621 (+)
afap1l2 afap1l2,LOC107755545,LOC107702445,LOC107689955,LOC107707932 coding downstream 374834 13275233 ~ 13307508 (+)
si:ch211-225b10.3 LOC107702429,LOC107566028,LOC107755542,LOC107707918 coding downstream 433827 13334226 ~ 13339065 (+)
ccdc186 ccdc186,LOC107566113,LOC107581550 coding downstream 444583 13344982 ~ 13367920 (+)
G87753 NA non-coding upstream 341340 12556682 ~ 12558732 (+)
G87718 NA non-coding upstream 422163 12476805 ~ 12477909 (+)
G87669 NA non-coding upstream 659871 12239783 ~ 12240201 (+)
G87665 NA non-coding upstream 741564 12158246 ~ 12158508 (+)
G87664 NA non-coding upstream 742257 12157586 ~ 12157815 (+)
G87934 NA non-coding downstream 295585 13195984 ~ 13197074 (+)
G87979 LOC107755539,LOC107566694,LOC107702418,LOC107708141,LOC107689963 non-coding downstream 448550 13348949 ~ 13383848 (+)
G87981 NA non-coding downstream 459915 13360314 ~ 13361050 (+)
G88010 NA non-coding downstream 529014 13429413 ~ 13431559 (+)
G88062 NA non-coding downstream 635767 13536166 ~ 13538088 (+)
gall si:rp71-1c10.8,LOC107677873,LOC107743798,LOC107675007,LOC107566084,LOC107754084,LOC107563807 other upstream 137341 12760374 ~ 12762731 (+)
G87817 NA other upstream 162423 12732764 ~ 12737649 (+)
nbr1a nbr1,LOC107669491,LOC107706899,LOC107582742,LOC107727312,LOC107666919 other upstream 954437 11936841 ~ 11945635 (+)
hoxb6b hoxb6b,LOC107669478,LOC107706870,LOC107582852,LOC107552740,LOC107666911,LOC107727299 other upstream 1015975 11882151 ~ 11884097 (+)
G87315 zeb1b,LOC107666916,LOC107706887,LOC107727309,LOC107582755,LOC107552760,LOC107669492 other upstream 1198417 11694844 ~ 11701655 (+)
G88016 NA other downstream 541544 13441943 ~ 13444915 (+)
G88082 NA other downstream 695395 13595794 ~ 13596348 (+)
gucy2g gucy2g,LOC107702423,LOC107755438,LOC107722192,LOC107581632,LOC107684125,LOC107571103,LOC108273537 other downstream 955296 13855695 ~ 13864743 (+)
LOC122355339 LOC107702424 other downstream 993962 13894361 ~ 13904627 (+)
rnf157 rnf157,si:dkey-49c17.3,LOC107702467,LOC107755520,LOC107684047,LOC107722211 other downstream 1077772 13978171 ~ 13993044 (+)

Expression


Co-expression Network