G88016


Basic Information

Item Value
gene id G88016
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13441943 ~ 13444915 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU130259
CTGTCTTTTCATCaaaatttttgttgttgatgatgatgCACTTGCCGACACGCCGGTGGCTCATCTTATACTGGAATGTTGGTGAAACAATCCTGTAATGGCTTTCAGAAGATTGCTCTTTTTCCTGCAGTTTGCCATCCTTCTTCTTACtTTCCAAAAAGCACAAATCTCCCTTTGCGGTCAGGTTTTGCATCTACTGTGTCTCCTTCTCCACAGTCTTGGTCCTCCATTGTTTCTTTACTCTCAGTGGTGAAGGTTTCTGCATCCAttttttttttttttgtcggaTCAGCTTCTGTTTTGTTCGTTGCTCTTTCAAGTTTAAGGTTACTAGACGGAGAAAACGAAACTACTGCCCAACTCCTTGTCTTCCATTTCCTCCAGCCGGAATGTCTCgtgtatttaaagaaacagagTCAATTTAAATGTGTTGAAAACCACTGCGCTAACCTCCTGCTTATTAATCACACATAgaatatagaatagaatagaatagaatagaatagaatgaaacgtatttagaaataaaaaaccttttaattatctatctgtattaattaattaattaattaaattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130259 True 577 TUCP 0.36 3 13441943 13444915

Neighbor

gene id symbol gene type direction distance location
si:ch211-28p3.4 si:ch211-28p3.4,LOC107702431,LOC107566824,LOC107755441 coding upstream 4916 13433835 ~ 13437027 (+)
dclre1a dclre1a,LOC107755538,LOC107702450,LOC107566699,LOC107708134 coding upstream 36157 13398598 ~ 13405786 (+)
ccdc186 ccdc186,LOC107566113,LOC107581550 coding upstream 74023 13344982 ~ 13367920 (+)
si:ch211-225b10.3 LOC107702429,LOC107566028,LOC107755542,LOC107707918 coding upstream 102878 13334226 ~ 13339065 (+)
afap1l2 afap1l2,LOC107755545,LOC107702445,LOC107689955,LOC107707932 coding upstream 134435 13275233 ~ 13307508 (+)
LOC122355710 LOC107755535,LOC107702452,LOC107684034,LOC107707842 coding downstream 1518 13446433 ~ 13462669 (+)
thbs2b thbs2b,LOC107755534,LOC107702453,LOC107566173,LOC107581559,LOC107707836,LOC107684035 coding downstream 37143 13482058 ~ 13497837 (+)
kcnk1a kcnk1a,LOC107755439,LOC107566833,LOC107708431,LOC107684143,LOC107702432 coding downstream 62670 13507585 ~ 13511837 (+)
slc35f3a slc35f3a,LOC107702433,LOC107581666,LOC107566839 coding downstream 68679 13513594 ~ 13523325 (+)
aldh18a1 aldh18a1,LOC107755531,LOC107707764,LOC107684039,LOC107702454 coding downstream 96403 13541318 ~ 13551229 (+)
G88010 NA non-coding upstream 10384 13429413 ~ 13431559 (+)
G87979 LOC107755539,LOC107566694,LOC107702418,LOC107708141,LOC107689963 non-coding upstream 58095 13348949 ~ 13383848 (+)
G87981 NA non-coding upstream 80893 13360314 ~ 13361050 (+)
G87934 NA non-coding upstream 244869 13195984 ~ 13197074 (+)
G87891 NA non-coding upstream 541544 12900072 ~ 12900399 (+)
G88062 NA non-coding downstream 91251 13536166 ~ 13538088 (+)
G88063 NA non-coding downstream 94874 13539789 ~ 13540023 (+)
G88079 NA non-coding downstream 135163 13580078 ~ 13580291 (+)
G88106 NA non-coding downstream 265089 13710004 ~ 13710239 (+)
G88111 NA non-coding downstream 270669 13715584 ~ 13717132 (+)
gall si:rp71-1c10.8,LOC107677873,LOC107743798,LOC107675007,LOC107566084,LOC107754084,LOC107563807 other upstream 679212 12760374 ~ 12762731 (+)
G87817 NA other upstream 704294 12732764 ~ 12737649 (+)
nbr1a nbr1,LOC107669491,LOC107706899,LOC107582742,LOC107727312,LOC107666919 other upstream 1496308 11936841 ~ 11945635 (+)
hoxb6b hoxb6b,LOC107669478,LOC107706870,LOC107582852,LOC107552740,LOC107666911,LOC107727299 other upstream 1557846 11882151 ~ 11884097 (+)
G87315 zeb1b,LOC107666916,LOC107706887,LOC107727309,LOC107582755,LOC107552760,LOC107669492 other upstream 1740288 11694844 ~ 11701655 (+)
G88082 NA other downstream 150879 13595794 ~ 13596348 (+)
gucy2g gucy2g,LOC107702423,LOC107755438,LOC107722192,LOC107581632,LOC107684125,LOC107571103,LOC108273537 other downstream 410780 13855695 ~ 13864743 (+)
LOC122355339 LOC107702424 other downstream 449446 13894361 ~ 13904627 (+)
rnf157 rnf157,si:dkey-49c17.3,LOC107702467,LOC107755520,LOC107684047,LOC107722211 other downstream 533256 13978171 ~ 13993044 (+)
stxbp4 stxbp4,LOC107702473,LOC107581670 other downstream 661041 14105956 ~ 14131785 (+)

Expression


Co-expression Network