G88019


Basic Information

Item Value
gene id G88019
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13433894 ~ 13434125 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU130263
CTGAGTTTGCGTCTTCATCATTGAATCTAGTAGCAGTTCTTCAGTTAATTTGACTGGTTTGGTTTTCTTCTATGGTGTTCTTATTCTCCACTAGCAAATGACTAGCCTAAGCCACAAACTTTGAGCTTTATACTGTTAACATGCCAAGGATAGAGGAGGGGTGACGGTCCATCTGTTGTTCCTGTGCCCTGGGAAGTATTCGTGTTGTACAACTAGGGTCCGTAAATCTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130263 True 232 lncRNA 0.43 1 13433894 13434125

Neighbor

gene id symbol gene type direction distance location
LOC122355076 LOC107566710,LOC107684141,LOC107581554 coding downstream 10936 13418717 ~ 13422958 (-)
LOC122355682 NA coding downstream 15638 13414181 ~ 13418256 (-)
plekhs1.1 LOC107566815,LOC107755416,LOC107702419 coding downstream 23613 13405793 ~ 13410281 (-)
nhlrc2 nhlrc2,LOC107755539,LOC107708141,LOC107702418,LOC107684116 coding downstream 35507 13381644 ~ 13398387 (-)
adrb1 adrb1,LOC107755541,LOC107566002,LOC107702449,LOC107689959,LOC107581665 coding downstream 58406 13372489 ~ 13375488 (-)
casp7 casp7,LOC107707870,LOC107684033,LOC107581558,LOC107566160 coding upstream 2782 13436907 ~ 13444732 (-)
crygmx crygmx,LOC107755411,LOC107566847,LOC107684144,LOC107581668 coding upstream 119431 13553556 ~ 13555025 (-)
crygmxl2 crygmxl2,LOC107566855,LOC107708427,LOC107702435,LOC107581669,LOC107684145 coding upstream 121568 13555693 ~ 13557090 (-)
vti1a vti1a,LOC107702459,LOC106589328,LOC107566351 coding upstream 285546 13719671 ~ 13839456 (-)
acsl5 acsl5,LOC107702457,LOC107566323,LOC107722228,LOC107755526,LOC107581566,LOC107684041 coding upstream 412048 13846173 ~ 13854773 (-)
G88003 NA non-coding downstream 65574 13365953 ~ 13368320 (-)
G87860 gabrz,LOC108273489,LOC107675029,LOC107754081,LOC107565977 non-coding downstream 626248 12804696 ~ 12807646 (-)
LOC122355629 NA non-coding downstream 795158 12613150 ~ 12638736 (-)
G87746 NA non-coding downstream 946499 12438750 ~ 12487395 (-)
G87695 LOC107669482,LOC107552775 non-coding downstream 1086828 12344898 ~ 12347066 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding upstream 24331 13458456 ~ 13459865 (-)
G88035 nrap,LOC107702452,LOC107755535 non-coding upstream 26020 13460145 ~ 13461245 (-)
LOC122355666 NA non-coding upstream 274930 13709055 ~ 13712541 (-)
G88146 NA non-coding upstream 390475 13824600 ~ 13894358 (-)
G88205 NA non-coding upstream 559535 13993660 ~ 13994186 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other downstream 1699 13424308 ~ 13432195 (-)
G87845 LOC107675011 other downstream 681216 12751904 ~ 12752678 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other downstream 758422 12649383 ~ 12675472 (-)
G87608 NA other downstream 1482739 11948540 ~ 11951155 (-)
G87569 NA other downstream 1598282 11832879 ~ 11835612 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other upstream 89543 13523668 ~ 13540301 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other upstream 175295 13609420 ~ 13691340 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other upstream 538757 13972882 ~ 13976511 (-)
G88250 LOC107702476 other upstream 713922 14148047 ~ 14150005 (-)
G88365 NA other upstream 1107441 14541566 ~ 14643780 (-)

Expression


Co-expression Network