G88082


Basic Information

Item Value
gene id G88082
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13595794 ~ 13596348 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU130341
tagagacgcacactcgcacccactgcttctagcagcagaccgcaaaagtcggagctttgcacccaccgccgtggacagctcccgccagcgacggtcgttcacacatgctgttattacagtggactgctctagccggagtactgcacccaccgccgtggaccactcccactagagacgctcacacgcacccactgccttcagcagcagactgcaagcaggagcattgcacccaccgccgtggaccgctcccgctgtacatgacaacatacaaacccgccaccgctgcggccaacacaggcaggagcattgcacccaccgccgtggaccgctcccgccgtatacgacaatatacaaacccgccaccgcggtggccaacacaggtaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130341 True 387 TUCP 0.62 2 13595794 13596348

Neighbor

gene id symbol gene type direction distance location
aldh18a1 aldh18a1,LOC107755531,LOC107707764,LOC107684039,LOC107702454 coding upstream 44565 13541318 ~ 13551229 (+)
slc35f3a slc35f3a,LOC107702433,LOC107581666,LOC107566839 coding upstream 72469 13513594 ~ 13523325 (+)
kcnk1a kcnk1a,LOC107755439,LOC107566833,LOC107708431,LOC107684143,LOC107702432 coding upstream 83957 13507585 ~ 13511837 (+)
thbs2b thbs2b,LOC107755534,LOC107702453,LOC107566173,LOC107581559,LOC107707836,LOC107684035 coding upstream 97957 13482058 ~ 13497837 (+)
LOC122355710 LOC107755535,LOC107702452,LOC107684034,LOC107707842 coding upstream 133125 13446433 ~ 13462669 (+)
zdhhc6 zdhhc6,LOC107755527,LOC107684040,LOC107722226,LOC107702458 coding downstream 243135 13839483 ~ 13846089 (+)
gpam gpam,LOC107702461,LOC107566297,LOC107755524,LOC107581571,LOC107722223 coding downstream 276670 13873018 ~ 13894073 (+)
cpn1 cpn1,LOC107722209,LOC107684044,LOC107702463,LOC107755523 coding downstream 317828 13914176 ~ 13922686 (+)
LOC122355687 dnmbp,LOC107755522,LOC107702462,LOC107722208,LOC107684043,LOC107566369 coding downstream 329412 13925760 ~ 13967657 (+)
habp2 LOC107684127,LOC107722212,LOC107581633 coding downstream 372161 13968509 ~ 13972650 (+)
G88079 NA non-coding upstream 15503 13580078 ~ 13580291 (+)
G88063 NA non-coding upstream 55771 13539789 ~ 13540023 (+)
G88062 NA non-coding upstream 57706 13536166 ~ 13538088 (+)
G88010 NA non-coding upstream 164235 13429413 ~ 13431559 (+)
G87979 LOC107755539,LOC107566694,LOC107702418,LOC107708141,LOC107689963 non-coding upstream 211946 13348949 ~ 13383848 (+)
G88106 NA non-coding downstream 113656 13710004 ~ 13710239 (+)
G88111 NA non-coding downstream 119236 13715584 ~ 13717132 (+)
G88207 LOC107702472,LOC107581578,LOC107566485,LOC107722231,LOC108443562,LOC103039554,LOC107684050 non-coding downstream 432078 14028426 ~ 14090868 (+)
G88238 NA non-coding downstream 546365 14142713 ~ 14218976 (+)
G88270 enpp7.1,LOC107755405,LOC107684149,LOC107722193,LOC107581672,LOC107755509 non-coding downstream 637164 14233512 ~ 14243310 (+)
G88016 NA other upstream 150879 13441943 ~ 13444915 (+)
gall si:rp71-1c10.8,LOC107677873,LOC107743798,LOC107675007,LOC107566084,LOC107754084,LOC107563807 other upstream 833063 12760374 ~ 12762731 (+)
G87817 NA other upstream 858145 12732764 ~ 12737649 (+)
nbr1a nbr1,LOC107669491,LOC107706899,LOC107582742,LOC107727312,LOC107666919 other upstream 1650159 11936841 ~ 11945635 (+)
hoxb6b hoxb6b,LOC107669478,LOC107706870,LOC107582852,LOC107552740,LOC107666911,LOC107727299 other upstream 1711697 11882151 ~ 11884097 (+)
gucy2g gucy2g,LOC107702423,LOC107755438,LOC107722192,LOC107581632,LOC107684125,LOC107571103,LOC108273537 other downstream 259347 13855695 ~ 13864743 (+)
LOC122355339 LOC107702424 other downstream 298013 13894361 ~ 13904627 (+)
rnf157 rnf157,si:dkey-49c17.3,LOC107702467,LOC107755520,LOC107684047,LOC107722211 other downstream 381823 13978171 ~ 13993044 (+)
stxbp4 stxbp4,LOC107702473,LOC107581670 other downstream 509608 14105956 ~ 14131785 (+)
sfxn2 sfxn2,timp2a,LOC107755483,LOC107722238,LOC107581595,LOC107690949,LOC107565802,LOC107755484,LOC107684079,LOC103024286 other downstream 1333731 14930079 ~ 14940191 (+)

Expression


Co-expression Network