G88111


Basic Information

Item Value
gene id G88111
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13715584 ~ 13717132 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU130377
TAAACTCCATTCTTCTGTTCCACAAGGATCCTTTAAGACATCAACCACCGAACGGGGCTCAAAAAACAACACGCGAAGAAAAGTGTTGAAAACGACATTTCTAATGAGAGCAAGGACACCAGCACGGGTGAAATACAATACTGCTTTAATGACAGCGTCGAACCTAGACAAGCTTTTAGCATATCGACAGAAAACACTATTCAAAAAAGTAATCACCAATTGAACAAACATAAGATTATTCTGATCATTACTGGGTCTCTGGTCTGGAGCAAACAGCCACATGTAAAGTCACACCCACTGACACACAATAGTCCACACAGTGCAAACACAGTATCAGATCCGTGGCTCCAACTGATGGGTATTCACTCACATAATGGGACACACCAGAAGAAAACATAATTGATGGATGTCGTGTCACATCAACTGCATTCATTATTCACAGGAGAATGAGGATATTGTCGTGTGCATTTGTGCAACACGTTTGTACAATTGTGCACAGTTACCcagataataaattaaaataataataaaaaggaaaccTATTATCCCACTGCGTTTAACAAGAGAGGCCACAGATCTCCCTACACTAACTTGAATCTAACACactgacactcacacacacacacacacacaaacacagagccaTCTGTATTATCTATAGGGTGAAATATTATCTCTGGATGTGTGAACGAGTAAAAATAGAGAGATGCGTTGCGCAGTTTAAAACGCGGACCTCCCATCACGCTCTAAAGCAACCTCAGAAAAAGCACAGTCAGCGAACATTGACGCTCATTTCATGCAGGCCGCATGACATCGATTTAAGAGAGAAATTCTACTCAACTTTGACAGTTAAATTATtcaattgagaaaaaaaagttataaaatgttatacattaaacatttaaagtttttaattcAGGCTTTTGACTTGCAATGCTATGGAGTTTAaggattatttaaagtaaaaaggcaaataaaataatatttcctcAGTTTTCATCACTttacgaaaaaaaaacacaaaccttctATGCTTTTCTAACTTGGAAACTGAAACAAAGTGGGTGGAAATTAGTAAAGgcttaaacaaataataaaaaaaaagctaaaactgCTAAACTAGCTAGCTAGATGTCAGTAAATCATGAGCAAGGGCCCGTCTCTGCCGTGACCGCAGTGGGTCTTGCCTGCCTCTTTGTAGCCTGTTCTGTGATAGGAGCTAATCAGAGTCTCTTTCTCACTAAAGGCCTGCTAGCCAAAGTCACTTAGCAGGGTTAACGTCAggcataatgaaatattaaagtgtgtCTGTAACTGCCACTATTGTTGCCCCTCGGAATAAGATATAACCCATTTTTGACAAGTTTTCATCCTCCTCACATAGAAGGCACTACACGCAAACCAAATCAGCTACAGAGAAGAGGGTAATGAATAATCTATTTCATATTCCAAAGGCACCCGCtgcttagagagagagagagagagagagagagagagaaagagagagagagagaaaggagggaAGGAGACAGGGAGGCATAGAGGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130377 True 1549 lncRNA 0.39 1 13715584 13717132

Neighbor

gene id symbol gene type direction distance location
aldh18a1 aldh18a1,LOC107755531,LOC107707764,LOC107684039,LOC107702454 coding upstream 164355 13541318 ~ 13551229 (+)
slc35f3a slc35f3a,LOC107702433,LOC107581666,LOC107566839 coding upstream 192259 13513594 ~ 13523325 (+)
kcnk1a kcnk1a,LOC107755439,LOC107566833,LOC107708431,LOC107684143,LOC107702432 coding upstream 203747 13507585 ~ 13511837 (+)
thbs2b thbs2b,LOC107755534,LOC107702453,LOC107566173,LOC107581559,LOC107707836,LOC107684035 coding upstream 217747 13482058 ~ 13497837 (+)
LOC122355710 LOC107755535,LOC107702452,LOC107684034,LOC107707842 coding upstream 252915 13446433 ~ 13462669 (+)
zdhhc6 zdhhc6,LOC107755527,LOC107684040,LOC107722226,LOC107702458 coding downstream 122351 13839483 ~ 13846089 (+)
gpam gpam,LOC107702461,LOC107566297,LOC107755524,LOC107581571,LOC107722223 coding downstream 155886 13873018 ~ 13894073 (+)
cpn1 cpn1,LOC107722209,LOC107684044,LOC107702463,LOC107755523 coding downstream 197044 13914176 ~ 13922686 (+)
LOC122355687 dnmbp,LOC107755522,LOC107702462,LOC107722208,LOC107684043,LOC107566369 coding downstream 208628 13925760 ~ 13967657 (+)
habp2 LOC107684127,LOC107722212,LOC107581633 coding downstream 251377 13968509 ~ 13972650 (+)
G88106 NA non-coding upstream 5345 13710004 ~ 13710239 (+)
G88079 NA non-coding upstream 135293 13580078 ~ 13580291 (+)
G88063 NA non-coding upstream 175561 13539789 ~ 13540023 (+)
G88062 NA non-coding upstream 177496 13536166 ~ 13538088 (+)
G88010 NA non-coding upstream 284025 13429413 ~ 13431559 (+)
G88207 LOC107702472,LOC107581578,LOC107566485,LOC107722231,LOC108443562,LOC103039554,LOC107684050 non-coding downstream 311294 14028426 ~ 14090868 (+)
G88238 NA non-coding downstream 425581 14142713 ~ 14218976 (+)
G88270 enpp7.1,LOC107755405,LOC107684149,LOC107722193,LOC107581672,LOC107755509 non-coding downstream 516380 14233512 ~ 14243310 (+)
G88269 enpp7.1,LOC107684149,LOC107722193,LOC107755405,LOC107581672,LOC107702441 non-coding downstream 520281 14237413 ~ 14238303 (+)
LOC122355796 NA non-coding downstream 528220 14245352 ~ 14267029 (+)
G88082 NA other upstream 119236 13595794 ~ 13596348 (+)
G88016 NA other upstream 270669 13441943 ~ 13444915 (+)
gall si:rp71-1c10.8,LOC107677873,LOC107743798,LOC107675007,LOC107566084,LOC107754084,LOC107563807 other upstream 952853 12760374 ~ 12762731 (+)
G87817 NA other upstream 977935 12732764 ~ 12737649 (+)
nbr1a nbr1,LOC107669491,LOC107706899,LOC107582742,LOC107727312,LOC107666919 other upstream 1769949 11936841 ~ 11945635 (+)
gucy2g gucy2g,LOC107702423,LOC107755438,LOC107722192,LOC107581632,LOC107684125,LOC107571103,LOC108273537 other downstream 138563 13855695 ~ 13864743 (+)
LOC122355339 LOC107702424 other downstream 177229 13894361 ~ 13904627 (+)
rnf157 rnf157,si:dkey-49c17.3,LOC107702467,LOC107755520,LOC107684047,LOC107722211 other downstream 261039 13978171 ~ 13993044 (+)
stxbp4 stxbp4,LOC107702473,LOC107581670 other downstream 388824 14105956 ~ 14131785 (+)
sfxn2 sfxn2,timp2a,LOC107755483,LOC107722238,LOC107581595,LOC107690949,LOC107565802,LOC107755484,LOC107684079,LOC103024286 other downstream 1212947 14930079 ~ 14940191 (+)

Expression


Co-expression Network