G88146


Basic Information

Item Value
gene id G88146
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13824600 ~ 13894358 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU130423
TATTtgttaacattcatttatttcatattagtgCATTAAAActcttcacagaaaaaaaagagaaaagagtaaCAAAGAAAGCATGACCTCACTTGTTAGAGTTATTCATCTTTCAGTATTACTTCATGACACAGGATTCTCCGATTTTCcccattaagtttttttttttttattattattttgattggaTTTAGttattagcttttcatcaaACCAGAGTTTGGGAAACCTTATGACATAGCACAcaACAtctcaaaaaaataaaaaaaaaaaaaaaaaaagttattttctgtGCAGGGTTCAGTGAACCATATGTAGGTAGCCACAGGCTAATGGGCGATTGGTCCCTGGCTCGCCAGGTATCTTGTGCCTCAGAAATCCCTCCTCCATTTCCTCTAATCTCACCTTTTCTCTGGTGCTGACCCAGGGAGGCCCGTTTCATTCCCCACTGCACGCCAGAGGAGAGTGCTGTGATGGGAGCCGGCCCGGCCCTGCCAGCTCTGGCAGTCTCCCTCCCCACCGGCTCTTCTCTATTGATTTCTCCACTCTTGCCTAGCCGGGGTCTGCTCTACCAGTGCCC

Function

GO: NA

KEGG:

id description
ko00190 Oxidative phosphorylation

RNA

RNA id representative length rna type GC content exon number start site end site
TU130423 True 580 lncRNA 0.42 3 13824600 13894358

Neighbor

gene id symbol gene type direction distance location
crygmxl2 crygmxl2,LOC107566855,LOC107708427,LOC107702435,LOC107581669,LOC107684145 coding downstream 267510 13555693 ~ 13557090 (-)
crygmx crygmx,LOC107755411,LOC107566847,LOC107684144,LOC107581668 coding downstream 269575 13553556 ~ 13555025 (-)
casp7 casp7,LOC107707870,LOC107684033,LOC107581558,LOC107566160 coding downstream 379868 13436907 ~ 13444732 (-)
LOC122355076 LOC107566710,LOC107684141,LOC107581554 coding downstream 401642 13418717 ~ 13422958 (-)
LOC122355682 NA coding downstream 406344 13414181 ~ 13418256 (-)
nat9 LOC107702469,LOC107566461,LOC107581577,LOC107722187 coding upstream 106320 14000678 ~ 14003093 (-)
grin2cb grin2c,LOC107755516,LOC107702470,LOC107722186,LOC107684146,LOC107581635 coding upstream 149213 14043571 ~ 14081743 (-)
rab40b rab40b,LOC107702472,LOC107722231,LOC107581578,LOC107566485,LOC107755515,LOC107684050,LOC108443562 coding upstream 195486 14089844 ~ 14102103 (-)
LOC122355098 cox11,LOC107702474,LOC107566498,LOC107755514,LOC108443564,LOC102229253 coding upstream 208574 14102932 ~ 14105922 (-)
si:ch73-256g18.2 NA coding upstream 249245 14143603 ~ 14146727 (-)
LOC122355666 NA non-coding downstream 112059 13709055 ~ 13712541 (-)
G88035 nrap,LOC107702452,LOC107755535 non-coding downstream 363355 13460145 ~ 13461245 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding downstream 364735 13458456 ~ 13459865 (-)
G88019 NA non-coding downstream 390475 13433894 ~ 13434125 (-)
G88003 NA non-coding downstream 456280 13365953 ~ 13368320 (-)
G88205 NA non-coding upstream 99302 13993660 ~ 13994186 (-)
G88206 NA non-coding upstream 100014 13994372 ~ 13995952 (-)
G88233 NA non-coding upstream 237561 14131919 ~ 14133138 (-)
G88355 NA non-coding upstream 504002 14398360 ~ 14398928 (-)
G88384 NA non-coding upstream 786559 14680917 ~ 14684300 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other downstream 133260 13609420 ~ 13691340 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other downstream 284299 13523668 ~ 13540301 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other downstream 392405 13424308 ~ 13432195 (-)
G87845 LOC107675011 other downstream 1071922 12751904 ~ 12752678 (-)
prr15lb prr15lb,LOC107754107,LOC107675003,LOC107565730,LOC107743781,LOC107677864,LOC107563795 other downstream 1149128 12649383 ~ 12675472 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other upstream 78524 13972882 ~ 13976511 (-)
G88250 LOC107702476 other upstream 253689 14148047 ~ 14150005 (-)
G88365 NA other upstream 647208 14541566 ~ 14643780 (-)
LOC122355209 NA other upstream 808210 14702568 ~ 14706251 (-)
ndufaf8 NA other upstream 1399475 15293833 ~ 15295240 (-)

Expression


Co-expression Network