G88205


Basic Information

Item Value
gene id G88205
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13993660 ~ 13994186 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU130511
CGGACATCCAAAAAAGAGGTACAAAGATTTGAGATTTTTcaatctgcaaaaataaatatatatattaacataaagACGCAGATTAATGGTTCACTTAAACATTTCTCAGCTGTTTGCAGTCATACCATAGAAAGGATGCCGTagaaataaatatcaaaatacacTATGGTGGGGTGTGTCCAGTCCAGTGCAGGACGGCATGTTGTGAATTTTTCATTGTCTCTGGTAAGATTTAAATAATCCAGTACATCTTGCTTACTGCACGCTTTTTTAGGAAACACTAAATCTGCAAGCCAGGAAATATGTTAATACTGTTTTAGATGTCCACAAATTATTTAACCATGCAGACAGGCTAGTTATCTTTAGAACAACTGATGATTGTCTGTGCATTAAAGAAATAGCTGAATCTTTACTCACCTACTAGAAAAAGTAGACAGATAgcacagacagaaaaaacacTCATATCCAACTCTCTGTGTGAGACCACCTCTGGTTAGCAGACGACTGGCAACTGGTCCCACTCACCG

Function

GO:

id name namespace
GO:0030354 melanin-concentrating hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130511 True 527 lncRNA 0.37 1 13993660 13994186

Neighbor

gene id symbol gene type direction distance location
tectb tectb,LOC107755437,LOC107702437,LOC107566341,LOC107581573,LOC107684045,LOC107722201 coding downstream 121105 13864826 ~ 13872555 (-)
acsl5 acsl5,LOC107702457,LOC107566323,LOC107722228,LOC107755526,LOC107581566,LOC107684041 coding downstream 138887 13846173 ~ 13854773 (-)
vti1a vti1a,LOC107702459,LOC106589328,LOC107566351 coding downstream 154204 13719671 ~ 13839456 (-)
crygmxl2 crygmxl2,LOC107566855,LOC107708427,LOC107702435,LOC107581669,LOC107684145 coding downstream 436570 13555693 ~ 13557090 (-)
crygmx crygmx,LOC107755411,LOC107566847,LOC107684144,LOC107581668 coding downstream 438635 13553556 ~ 13555025 (-)
nat9 LOC107702469,LOC107566461,LOC107581577,LOC107722187 coding upstream 6492 14000678 ~ 14003093 (-)
grin2cb grin2c,LOC107755516,LOC107702470,LOC107722186,LOC107684146,LOC107581635 coding upstream 49385 14043571 ~ 14081743 (-)
rab40b rab40b,LOC107702472,LOC107722231,LOC107581578,LOC107566485,LOC107755515,LOC107684050,LOC108443562 coding upstream 95658 14089844 ~ 14102103 (-)
LOC122355098 cox11,LOC107702474,LOC107566498,LOC107755514,LOC108443564,LOC102229253 coding upstream 108746 14102932 ~ 14105922 (-)
si:ch73-256g18.2 NA coding upstream 149417 14143603 ~ 14146727 (-)
G88146 NA non-coding downstream 99302 13824600 ~ 13894358 (-)
LOC122355666 NA non-coding downstream 281119 13709055 ~ 13712541 (-)
G88035 nrap,LOC107702452,LOC107755535 non-coding downstream 532415 13460145 ~ 13461245 (-)
G88034 nrap,LOC107755535,LOC107702452 non-coding downstream 533795 13458456 ~ 13459865 (-)
G88019 NA non-coding downstream 559535 13433894 ~ 13434125 (-)
G88206 NA non-coding upstream 186 13994372 ~ 13995952 (-)
G88233 NA non-coding upstream 137733 14131919 ~ 14133138 (-)
G88355 NA non-coding upstream 404174 14398360 ~ 14398928 (-)
G88384 NA non-coding upstream 686731 14680917 ~ 14684300 (-)
G88381 NA non-coding upstream 712134 14706320 ~ 14709357 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other downstream 17149 13972882 ~ 13976511 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other downstream 302320 13609420 ~ 13691340 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other downstream 453359 13523668 ~ 13540301 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other downstream 561465 13424308 ~ 13432195 (-)
G87845 LOC107675011 other downstream 1240982 12751904 ~ 12752678 (-)
G88250 LOC107702476 other upstream 153861 14148047 ~ 14150005 (-)
G88365 NA other upstream 547380 14541566 ~ 14643780 (-)
LOC122355209 NA other upstream 708382 14702568 ~ 14706251 (-)
ndufaf8 NA other upstream 1299647 15293833 ~ 15295240 (-)
si:dkey-21c1.1 tepsin,si:dkey-21c1.1,LOC107601406,LOC107755426,LOC107684135,LOC107749856,LOC107601412,LOC107581605,LOC107749858 other upstream 1306111 15300297 ~ 15306509 (-)

Expression


Co-expression Network