G88365


Basic Information

Item Value
gene id G88365
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 14541566 ~ 14643780 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU130741
gtaaagacaacttttatttatttatttataagtcaagtattgtatttaaatcagcataaaatgtattttgtgcatCTTTGACTATAATAAACAGTGAAAACAATGAGAAATAGCAGGATTTACGTGACACTCTGTATAACTTATGTTGCCTGCTAGTTCAATAACATTAGGCTTCTTTTGAAAAACATGCCATAGAGATGACATTCACATTTTATGCTACTAGACCAACCTATATCTGAAAAAATAAGTTAAGATTGAGCAAAAATATCTGAGTATTCCAATGAGCTGTGTGATAGACGCAGTGTATCCAACCATAACATAATGTTCAGTGTACATGCAGAGTAAAATATACCCTCATAATTCAGATGCCATAAATATTTCAAGCTCAGATATTTGAGTCTCTGTTattgaagaaagaaatatttatttataaccaTATTAATcatgatagtaataataataatcataatcataataatataatgatttcaTTAATAAACAGTACTGGTTGTTTGAAGCACATTGGATGCATACAGaaagaaaactgaaatttaGAGTACAGATCCAGGACAGCAGAAGTTTcgtcatttcattttaaatagaatacTTTAtattggtttcttttttttctttagtttttttttttccacgctTATGTATTTGGAACAACTTCAAAATttgaaaaagaatgaaagaaaatgaaaacaaacaaaagaaaacccCAAATGATAGATTTGTTGTTGCGTAGAGCTTGTGTTGCACATGAAGAGAacctttaatataatacattttatattgagATGACAGAGGAAGTagcttttgtatattttcagtaGAAAACAAAGGGGCTGGAAgcacacgcacatacatacacgcacaccATACACACTACATGGAGGGTAACTATCACTGAGACGACTAACTTGACTTCCATTCAAACTCTTGTGCTTCGGGGATCTGGCAATGACGATGAGGAAAATCATGTTGGCAGGAGTTcgtatttttccttttttgtgttgGGAAAAGCAATTGCCAAGATAAGTTTGTCATTTCCATTGGCTTGACTGTGTTTGAATGAAGTTCAAGGGAACTGTGCAGACACAGGTGAGCTGCATAGCTGGTCCTACACCTGCCCTAATATTTAGAGCAGACGACCAGTGTAGATCTGAAGGACGTTTCGGATGGAGGAACAAGTGGCAGATACATGCGCTCGAGTTTCATTGTAGTTCTGACAATAGACTATAAGCAGACTACAGTTTGCATTGGTTCTCTGCTTTGGGTCGAGGAAGACGGCGAATGACTTTGGTGCTCAGGTTAATGGGCTGAAACAGAGAGAAGAGGGAAGACAACAAGCCAAAGAATACAGTGCAAAAGCTGACATATACCTCACAGCAGGGTCGAAAAAACCAGGACATGTAAACAAGTAATGCCTCGTACGGACTAAAGCAAAGAAATAAACCCAGAGGTCTGTAGAATTGACATCTTTTTGTTAGGTTGTTCAGTCACAATCTCGTCCAGAGCAGAATCCGCCACTCGGTTTTTAGAGTCCCTGAAACAACACGTCTTGGCCGAAGTTCCCGTCGCTATCTGACCCGGCGAACCGTTTTCCACCATCCTTCGGGTAACAAAGTAGCACAGTCGCTGAGATAGGAGTCACCAGCTTTgtagaaaataaagttttgttcTGAGAGGAAAAAATGCAGCAAGGAAGAGTAACATCATTACCTATGGAAGGGAACACGTCAGTTCTGTCATGTAACACCTGAGTCCGAGGAAGCGCATGATTTTGCAAAGCTTGGGAATGCCGTCTGTCGAGGTGGGCTATCTGTTAAATGTACCAATCCTTCTCACTGAGCCAAAATACACACTGTAAAAAGCATGAAATCGTGCAGTTGTTATTTCATAGAGGTGTGTCTTCCTGATCTGTCCCACTCGCTTTCACCGGTGCAGCCTAATGCAGTCAGGTTGATCCAGTCctgttaaatatgaaaatgctgaCCTGAATAAAACCGGTAACTTTAGATGTTATCAAAAGAAGcacatgtctctctctctctctctccctctctctctctctctctctctctctctctctctctctctctgaaaacCTCACTCTGCCTCTACTCcttcttctttgttttgtgcAGAAGTCTTTTTGATTCTATCTGCTTCTCTTTTCTGCTGTTCTTTCTGTGGACTGATTCTTTTTCTCAGCTGTTCTGGAGGTGGGCTGAACGCGGGCGTGCGAGTCGTCTGAATGGTCCTGGGCCCTCTGTCATCAAGGCTCGGCTGCGCACTTTCACTTACACtcttacacacgcacacacacatacggaaGCCAATGTGAGCCCTCGGAGAGAGAAAAGGGGAGGTTCTGCTCGAGCGAGggagagcaggaggaggaggaggaggaagggagGGATGCTGAGAGGGAGGAGGCAGGAGTTCCCGGGGGTATTCAAAG
>TU130744
aaagaaatatttatttataaccaTATTAATcatgatagtaataataataatcataatcataataatataatgatttcaTTAATAAACAGTACTGGTTGTTTGAAGCACATTGGATGCATACAGaaagaaaactgaaatttaGAGTACAGATCCAGGACAGCAGAAGTTTcgtcatttcattttaaatagaatacTTTAtattggtttcttttttttctttagtttttttttttccacgctTATGTATTTGGAACAACTTCAAAATttgaaaaagaatgaaagaaaatgaaaacaaacaaaagaaaacccCAAATGATAGATTTGTTGTTGCGTAGAGCTTGTGTTGCACATGAAGAGAacctttaatataatacattttatattgagATGACAGAGGAAGTagcttttgtatattttcagtaGAAAACAAAGGGGCTGGAAgcacacgcacatacatacacgcacaccATACACACTACATGGAGGGTAACTATCACTGAGACGACTAACTTGACTTCCATTCAAACTCTTGTGCTTCGGGGATCTGGCAATGACGATGAGGAAAATCATGTTGGCAGGAGTTcgtatttttccttttttgtgttgGGAAAAGCAATTGCCAAGATAAGTTTGTCATTTCCATTGGCTTGACTGTGTTTGAATGAAGTTCAAGGGAACTGTGCAGACACAGGTGAGCTGCATAGCTGGTCCTACACCTGCCCTAATATTTAGAGCAGACGACCAGTGTAGATCTGAAGGACGTTTCGGATGGAGGAACAAGTGGCAGATACATGCGCTCGAGTTTCATTGTAGTTCTGACAATAGACTATAAGCAGACTACAGTTTGCATTGGTTCTCTGCTTTGGGTCGAGGAAGACGGCGAATGACTTTGGTGCTCAGGTTAATGGGCTGAAACAGAGAGAAGAGGGAAGACAACAAGCCAAAGAATACAGTGCAAAAGCTGACATATACCTCACAGCAGGGTCGAAAAAACCAGGACATGTAAACAAGTAATGCCTCGTACGGACTAAAGCAAAGAAATAAACCCAGAGGTCTGTAGAATTGACATCTTTTTGTTAGGTTGTTCAGTCACAATCTCGTCCAGAGCAGAATCCGCCACTCGGTTTTTAGAGTCCCTGAAACAACACGTCTTGGCCGAAGTTCCCGTCGCTATCTGACCCGGCGAACCGTTTTCCACCATCCTTCGGGTAACAAAGTAGCACAGTCGCTGAGATAGGAGTCACCAGCTTTgtagaaaataaagttttgttcTGAGAGGAAAAAATGCAGCAAGGAAGAGTAACATCATTACCTATGGAAGGGAACACGTCAGTTCTGTCATGTAACACCTGAGTCCGAGGAAGCGCATGATTTTGCAAAGCTTGGGAATGCCGTCTGTCGAGGTGGGCTATCTGTTAAATGTACCAATCCTTCTCACTGAGCCAAAATACACACTGTAAAAAGCATGAAATCGTGCAGTTGTTATTTCATAGAGGTGTGTCTTCCTGATCTGTCCCACTCGCTTTCACCGGTGCAGCCTAATGCAGTCAGGTTGATCCAGTCctgttaaatatgaaaatgctgaCCTGAATAAAACCGGTAACTTTAGATGTTATCAAAAGAAGcacatgtctctctctctctctctctctctctctctctctctctctctctctctctctctgaaaacCTCACTCTGCCTCTACTCcttcttctttgttttgtgcAGAAGTCTTTTTGATTCTATCTGCTTCTCTTTTCTGCTGTTCTTTCTGTGGACTGATTCTTTTTCTCAGCTGTTCTGGAGGTGGGCTGAACGCGGGCGTGCGAGTCGTCTGAATGGTCCTGGGCCCTCTGTCATCAAGGCTCGGCTGCGCACTTTCACTTACACtcttacacacgcacacacacatacggaaGCCAATGTGAGCCCTCGGAGAGAGAAAAGGGGAGGTTCTGCTCGAGCGAGggagagcaggaggaggaggaggaggaagggagGGATGCTGAGAGGGAGGAGGCAGGAGTTCCCGGGGGTATTCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130741 True 2467 TUCP 0.41 2 14541566 14643780
TU130744 False 2046 TUCP 0.42 2 14541566 14643367

Neighbor

gene id symbol gene type direction distance location
LOC122355870 enpp7.2,LOC107755509,LOC107702441,LOC107581672,LOC107755405,LOC107566788,LOC107722193 coding downstream 298119 14240399 ~ 14243447 (-)
LOC122355813 LOC107755405,LOC107581672,LOC107684149,LOC107722193,LOC107755509,LOC107702441 coding downstream 301920 14235240 ~ 14239646 (-)
si:ch73-256g18.2 NA coding downstream 394839 14143603 ~ 14146727 (-)
LOC122355098 cox11,LOC107702474,LOC107566498,LOC107755514,LOC108443564,LOC102229253 coding downstream 435644 14102932 ~ 14105922 (-)
rab40b rab40b,LOC107702472,LOC107722231,LOC107581578,LOC107566485,LOC107755515,LOC107684050,LOC108443562 coding downstream 439463 14089844 ~ 14102103 (-)
c1qtnf1 LOC107702481,LOC107755506,LOC107566571,LOC107722189,LOC107581674,LOC107684055 coding upstream 18427 14662207 ~ 14670662 (-)
slc16a3b slc16a3,LOC107755502,LOC107581584,LOC107566576,LOC107702479,LOC107722214 coding upstream 41317 14685097 ~ 14691316 (-)
LOC122355547 zgc:91940,LOC107755433,LOC107684063,LOC107565788,LOC107722202,LOC107702442,LOC103021303,LOC106578881 coding upstream 84613 14728393 ~ 14730942 (-)
mbtd1 LOC107684067,LOC107565795,LOC107702488,LOC108430745,LOC107755495,LOC103045049,LOC107722179 coding upstream 116218 14759998 ~ 14770723 (-)
tdrkh tdrkh,LOC107755494,LOC107702489,LOC107722206 coding upstream 128100 14771880 ~ 14780197 (-)
G88355 NA non-coding downstream 142638 14398360 ~ 14398928 (-)
G88233 NA non-coding downstream 408428 14131919 ~ 14133138 (-)
G88206 NA non-coding downstream 545614 13994372 ~ 13995952 (-)
G88205 NA non-coding downstream 547380 13993660 ~ 13994186 (-)
G88146 NA non-coding downstream 647208 13824600 ~ 13894358 (-)
G88384 NA non-coding upstream 37137 14680917 ~ 14684300 (-)
G88381 NA non-coding upstream 62540 14706320 ~ 14709357 (-)
G88403 fasn,LOC107702482,LOC107579490 non-coding upstream 76735 14720515 ~ 14721234 (-)
G88603 NA non-coding upstream 364718 15008498 ~ 15009558 (-)
G88605 cyth2,cyth1,LOC103381773,LOC107717468,LOC100709795 non-coding upstream 367143 15010923 ~ 15013151 (-)
G88250 LOC107702476 other downstream 391561 14148047 ~ 14150005 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other downstream 565055 13972882 ~ 13976511 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other downstream 850226 13609420 ~ 13691340 (-)
entpd1 LOC107707825,LOC107755533,LOC107581561,LOC107702455,LOC107684037,LOC107566185 other downstream 1001265 13523668 ~ 13540301 (-)
LOC122355808 LOC107684141,LOC107702421,LOC107581556,LOC107684142,LOC107708119,LOC107708127 other downstream 1109371 13424308 ~ 13432195 (-)
LOC122355209 NA other upstream 58788 14702568 ~ 14706251 (-)
ndufaf8 NA other upstream 650053 15293833 ~ 15295240 (-)
si:dkey-21c1.1 tepsin,si:dkey-21c1.1,LOC107601406,LOC107755426,LOC107684135,LOC107749856,LOC107601412,LOC107581605,LOC107749858 other upstream 656517 15300297 ~ 15306509 (-)
bicral gltscr1l,LOC107690921,LOC107601433,LOC107749855,LOC107684087,LOC107581606 other upstream 666789 15310569 ~ 15319858 (-)
pmp22b pmp22,LOC107561836,LOC107684480,LOC107597829,LOC107692454,LOC107753252 other upstream 1956115 16599895 ~ 16609807 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G238931 NA non-coding CI01000055 null 2045106 ~ 2079699 (-)