G88403 (fasn,LOC107702482,LOC107579490)


Basic Information

Item Value
gene id G88403
gene name fasn,LOC107702482,LOC107579490
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 14720515 ~ 14721234 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU130793
CAGGGATGGCATCTGGAGGCAGTTTACCAGTGGCCAGCATGATGTCTCTGAAGTTGAGGGAGGAGTAGTAAACACGGCAGAGCTGCACGTTGGGATTGGATGGGACAAAATGACGTAGTGGGGAAGCGATCCATCTCAGCGATGAAAGATCACCGCGAGTCAGGACATTAATGTAGGCCTGCTCTGTCACCTCCTCGCTAAACCTTGCGTTAACAACTCGTGTCTAAAAACACCCCACTGTCCATCACGGGACACGTTCATGACCAGATCCTTCTGTAATAATGCTTTCATCTCTTTTTGGGTTGGAACAAGGGAGGGGACTTCAGAGTccttatttaaatttgaaacaaATGCACATCTATtggagaagagaaaaaagatcaggtactttatttatatatattttactgcatAATCgtaacaacaaaaatgtagcaAAAGTACAGTTGCATATGTGGAACATTGATTCAACAGGAATTGGACGGACCGTATACGGTTGCCCCCGGGTTCCTGTCTGAGGCAGTTCACCATTCCCACCACACCATTATGACCCTTAGTGGTAATGAGCCAGACTGGGATATCAGATGACTCAGCTAAAGTGCt

Function

symbol description
fasn Acts upstream of or within response to (R)-carnitine. Is expressed in liver and male organism. Orthologous to human FASN (fatty acid synthase).

NR:

description
PREDICTED: fatty acid synthase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130793 True 603 lncRNA 0.45 2 14720515 14721234

Neighbor

gene id symbol gene type direction distance location
slc16a3b slc16a3,LOC107755502,LOC107581584,LOC107566576,LOC107702479,LOC107722214 coding downstream 29199 14685097 ~ 14691316 (-)
c1qtnf1 LOC107702481,LOC107755506,LOC107566571,LOC107722189,LOC107581674,LOC107684055 coding downstream 49853 14662207 ~ 14670662 (-)
LOC122355870 enpp7.2,LOC107755509,LOC107702441,LOC107581672,LOC107755405,LOC107566788,LOC107722193 coding downstream 477068 14240399 ~ 14243447 (-)
LOC122355813 LOC107755405,LOC107581672,LOC107684149,LOC107722193,LOC107755509,LOC107702441 coding downstream 480869 14235240 ~ 14239646 (-)
si:ch73-256g18.2 NA coding downstream 573788 14143603 ~ 14146727 (-)
LOC122355547 zgc:91940,LOC107755433,LOC107684063,LOC107565788,LOC107722202,LOC107702442,LOC103021303,LOC106578881 coding upstream 7159 14728393 ~ 14730942 (-)
mbtd1 LOC107684067,LOC107565795,LOC107702488,LOC108430745,LOC107755495,LOC103045049,LOC107722179 coding upstream 38764 14759998 ~ 14770723 (-)
tdrkh tdrkh,LOC107755494,LOC107702489,LOC107722206 coding upstream 50646 14771880 ~ 14780197 (-)
tmem94 LOC107755493,LOC107565798,LOC107722205,LOC107581589 coding upstream 61899 14783133 ~ 14802730 (-)
LOC122355340 LOC107702443,LOC107755432,LOC107565781,LOC108429162,LOC107684133 coding upstream 82348 14803582 ~ 14829643 (-)
G88381 NA non-coding downstream 11158 14706320 ~ 14709357 (-)
G88384 NA non-coding downstream 36215 14680917 ~ 14684300 (-)
G88355 NA non-coding downstream 321587 14398360 ~ 14398928 (-)
G88233 NA non-coding downstream 587377 14131919 ~ 14133138 (-)
G88206 NA non-coding downstream 724563 13994372 ~ 13995952 (-)
G88603 NA non-coding upstream 287264 15008498 ~ 15009558 (-)
G88605 cyth2,cyth1,LOC103381773,LOC107717468,LOC100709795 non-coding upstream 289689 15010923 ~ 15013151 (-)
LOC122355054 NA non-coding upstream 392845 15114079 ~ 15117307 (-)
G88635 NA non-coding upstream 525301 15246535 ~ 15247957 (-)
G88648 LOC107755474,LOC107690923,LOC107601434,LOC107684155,LOC107749866,LOC107581680 non-coding upstream 599293 15320527 ~ 15321751 (-)
LOC122355209 NA other downstream 14264 14702568 ~ 14706251 (-)
G88365 NA other downstream 76735 14541566 ~ 14643780 (-)
G88250 LOC107702476 other downstream 570510 14148047 ~ 14150005 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other downstream 744004 13972882 ~ 13976511 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other downstream 1029175 13609420 ~ 13691340 (-)
ndufaf8 NA other upstream 572599 15293833 ~ 15295240 (-)
si:dkey-21c1.1 tepsin,si:dkey-21c1.1,LOC107601406,LOC107755426,LOC107684135,LOC107749856,LOC107601412,LOC107581605,LOC107749858 other upstream 579063 15300297 ~ 15306509 (-)
bicral gltscr1l,LOC107690921,LOC107601433,LOC107749855,LOC107684087,LOC107581606 other upstream 589335 15310569 ~ 15319858 (-)
pmp22b pmp22,LOC107561836,LOC107684480,LOC107597829,LOC107692454,LOC107753252 other upstream 1878661 16599895 ~ 16609807 (-)
G88940 sdk2,sdk2b,LOC107721024,LOC107753272,LOC107597834 other upstream 1995185 16716419 ~ 16719298 (-)

Expression


Co-expression Network