G88455


Basic Information

Item Value
gene id G88455
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 14921169 ~ 14927413 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU130867
tttttttttttttttttttttttttttttTTTTCAGGATGATTTTTACTTCAGCAGTTTCACACACATCACAAAATTTAGAGAAGCTACAGAAATAATCTTGATGTGATGACGGCAGACGTCCTCTTGTACTCTTCAATGTATAGATTACAGCTGTACAGGCCACTTACATTATCGAGCTCTAAGAAATCCTTAAATTATGGATTTGTAAAATTTgacagtatttatatatgcagaaAATAATCTGATATTTggacattatttacatttaattatcaaAAACATCATATTGGTGGTGcccttttattttgtatatactgACGTCTGTTGTATGTTGCATTTGGGTACCGTAATTCTTTTCTCTGTTACTCTCAGTAAACCTATAAAAATATGACCTTAGATGGAGTAACGAGAGTGTTATATCAGTGAATGATGCCAGTAAGGAAGGACAACAGTTGAACTGAATGATGAAGGctgtcactttttaaatgtcCCAGTAACAAAATCCTCTAAATAACTATAACATTCAATATAAAAGCACAAGTCATTCATCTCAAGAAATGAAGGCAGAAATTAATTAAGATTTGAAGTGTACTAAAGGATACAAGTCAAATCTGAAATCACTCGGATGTACATTCTTAATTTTGGGTTTAAAAGACTAGTGATAGGATCGTATGGATACTGGACCGAAGCAGGCCCAAAAGGAGAGgcaaaagtgaaattaaatggTTTTGAAGGGATGCCTCCATTTCTTATACCTACTGACAGTGTTTGTTTAAGTCATGGTTTTATTCCTCCCGCTTGGAAACCAGCTCTATTTCCTCTTAGCGTTCACACTCTTGCAGACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130867 True 848 lncRNA 0.34 2 14921169 14927413

Neighbor

gene id symbol gene type direction distance location
trim8b trim8b,LOC107565801,LOC107581594,LOC107684075,LOC107690907,LOC107722222,LOC107755490 coding upstream 7814 14903079 ~ 14913355 (+)
mfsd13a mfsd13a,LOC107565800,LOC107690908,LOC107755491,LOC107581593,LOC107684076 coding upstream 19636 14892417 ~ 14901533 (+)
mrpl43 mrpl43,LOC107722220,LOC107565786,LOC107581592 coding upstream 54421 14865424 ~ 14866748 (+)
slc9a3r1a LOC107702487,LOC107565796,LOC107755498,LOC107722225,LOC107684064,LOC107581587 coding upstream 158221 14740339 ~ 14762948 (+)
narf narf,LOC107702486,LOC107565794,LOC107755497,LOC107722235,LOC107684062 coding upstream 181291 14731409 ~ 14739878 (+)
cyth1b cyth1b,LOC107690912,LOC107581598,LOC107755486,LOC108426518,LOC108274176,LOC107684080,LOC103022618 coding downstream 30946 14958359 ~ 15016511 (+)
socs3b socs3b,LOC107755481,LOC107601442,LOC107581599,LOC107690914,LOC107684082,LOC107722230 coding downstream 108919 15036332 ~ 15039952 (+)
tha1 tha1,LOC107722240,LOC107581676,LOC107684134,LOC107683136 coding downstream 143590 15071003 ~ 15081443 (+)
slc38a10 slc38a10,LOC107690917 coding downstream 340015 15267428 ~ 15292680 (+)
tepsin tepsin,enthd2,LOC107755426,LOC107749856,LOC107601406 coding downstream 368060 15295473 ~ 15302620 (+)
LOC122355815 NA non-coding upstream 2130 14917762 ~ 14919039 (+)
G88296 NA non-coding upstream 137231 14780915 ~ 14783938 (+)
LOC122355796 NA non-coding upstream 654140 14245352 ~ 14267029 (+)
G88270 enpp7.1,LOC107755405,LOC107684149,LOC107722193,LOC107581672,LOC107755509 non-coding upstream 677859 14233512 ~ 14243310 (+)
G88269 enpp7.1,LOC107684149,LOC107722193,LOC107755405,LOC107581672,LOC107702441 non-coding upstream 682866 14237413 ~ 14238303 (+)
G88509 NA non-coding downstream 312556 15239969 ~ 15240364 (+)
G88543 NA non-coding downstream 587858 15515271 ~ 15778531 (+)
G88546 ankfn1,LOC107581638,LOC107684130,LOC107702427 non-coding downstream 621817 15549230 ~ 15571632 (+)
G88548 NA non-coding downstream 649554 15576967 ~ 15645470 (+)
G88550 LOC107566773,LOC107702427,LOC107581638,LOC107684130 non-coding downstream 658701 15586114 ~ 15647353 (+)
stxbp4 stxbp4,LOC107702473,LOC107581670 other upstream 789384 14105956 ~ 14131785 (+)
rnf157 rnf157,si:dkey-49c17.3,LOC107702467,LOC107755520,LOC107684047,LOC107722211 other upstream 928125 13978171 ~ 13993044 (+)
LOC122355339 LOC107702424 other upstream 1016542 13894361 ~ 13904627 (+)
gucy2g gucy2g,LOC107702423,LOC107755438,LOC107722192,LOC107581632,LOC107684125,LOC107571103,LOC108273537 other upstream 1056426 13855695 ~ 13864743 (+)
G88082 NA other upstream 1324821 13595794 ~ 13596348 (+)
sfxn2 sfxn2,timp2a,LOC107755483,LOC107722238,LOC107581595,LOC107690949,LOC107565802,LOC107755484,LOC107684079,LOC103024286 other downstream 2666 14930079 ~ 14940191 (+)
si:dkey-21c1.4 LOC107755475,LOC107576597,LOC107690918 other downstream 380013 15307426 ~ 15312004 (+)
qki2 qki2,LOC108426533,LOC107755469,LOC107690925,LOC107601430,LOC103029551 other downstream 419132 15346545 ~ 15378101 (+)
LOC122355837 ndst2b,LOC107601424,LOC107755463,LOC107690932,LOC107749844,LOC107684097,LOC107561853,LOC108410510 other downstream 524081 15451494 ~ 15774014 (+)
baiap2b baiap2b,LOC107684102,LOC107749842,LOC107690938,LOC107755398,LOC108273716 other downstream 905871 15833284 ~ 15928026 (+)

Expression


Co-expression Network