G88509


Basic Information

Item Value
gene id G88509
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 15239969 ~ 15240364 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU130930
GCGACTGTAAGCTGCACTGTTGTTTTAAACCGATAGTTTTTCGAAGCACGTTTGCGCTTCGCGAAAGGGACACGCCGGGCGTCGATACAATGTGTTAGATAAATCCCGACGGGTCTGCGAGCGGAAGATGTGCAGAGGTGGTGAGATCAGTACTATAGAAACACCACAAAACACACGTTCGCTTCAACATGTCGTTTACTTAAATAACTACAGATTTACCTTGAGGAAACACGGGCAATCCGCTACAAAATACATATGTTGTCCTGAAACAAAACCAAAGCCCGACTCTTacaaacaagttgtgtttttacaTCCAAAACAGGCTATTTGCCTTGAAAGCGAGGCGTATTTCCCACTCATCCCCGGAGCAAAAAATGTGCCCCCACCCCTACCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130930 True 396 lncRNA 0.46 1 15239969 15240364

Neighbor

gene id symbol gene type direction distance location
tha1 tha1,LOC107722240,LOC107581676,LOC107684134,LOC107683136 coding upstream 158526 15071003 ~ 15081443 (+)
socs3b socs3b,LOC107755481,LOC107601442,LOC107581599,LOC107690914,LOC107684082,LOC107722230 coding upstream 200017 15036332 ~ 15039952 (+)
cyth1b cyth1b,LOC107690912,LOC107581598,LOC107755486,LOC108426518,LOC108274176,LOC107684080,LOC103022618 coding upstream 223458 14958359 ~ 15016511 (+)
trim8b trim8b,LOC107565801,LOC107581594,LOC107684075,LOC107690907,LOC107722222,LOC107755490 coding upstream 326614 14903079 ~ 14913355 (+)
mfsd13a mfsd13a,LOC107565800,LOC107690908,LOC107755491,LOC107581593,LOC107684076 coding upstream 338436 14892417 ~ 14901533 (+)
slc38a10 slc38a10,LOC107690917 coding downstream 27064 15267428 ~ 15292680 (+)
tepsin tepsin,enthd2,LOC107755426,LOC107749856,LOC107601406 coding downstream 55109 15295473 ~ 15302620 (+)
tbcc LOC107755474,LOC107690923,LOC107601434,LOC107684155,LOC107749866,LOC107581680 coding downstream 80134 15320498 ~ 15321752 (+)
prph2a prph2,prph2a,LOC107601435,LOC107581607,LOC107684088 coding downstream 81905 15322269 ~ 15327031 (+)
timm23a timm23a,LOC107690962,LOC107684090,LOC107749852,LOC107561858,LOC108426535 coding downstream 144413 15384777 ~ 15389455 (+)
G88455 NA non-coding upstream 312556 14921169 ~ 14927413 (+)
LOC122355815 NA non-coding upstream 320930 14917762 ~ 14919039 (+)
G88296 NA non-coding upstream 456031 14780915 ~ 14783938 (+)
LOC122355796 NA non-coding upstream 972940 14245352 ~ 14267029 (+)
G88270 enpp7.1,LOC107755405,LOC107684149,LOC107722193,LOC107581672,LOC107755509 non-coding upstream 996659 14233512 ~ 14243310 (+)
G88543 NA non-coding downstream 274907 15515271 ~ 15778531 (+)
G88546 ankfn1,LOC107581638,LOC107684130,LOC107702427 non-coding downstream 308866 15549230 ~ 15571632 (+)
G88548 NA non-coding downstream 336603 15576967 ~ 15645470 (+)
G88550 LOC107566773,LOC107702427,LOC107581638,LOC107684130 non-coding downstream 345750 15586114 ~ 15647353 (+)
G88551 ankfn1,LOC107702427,LOC107684130,LOC107566773 non-coding downstream 361931 15602295 ~ 15604006 (+)
sfxn2 sfxn2,timp2a,LOC107755483,LOC107722238,LOC107581595,LOC107690949,LOC107565802,LOC107755484,LOC107684079,LOC103024286 other upstream 299778 14930079 ~ 14940191 (+)
stxbp4 stxbp4,LOC107702473,LOC107581670 other upstream 1108184 14105956 ~ 14131785 (+)
rnf157 rnf157,si:dkey-49c17.3,LOC107702467,LOC107755520,LOC107684047,LOC107722211 other upstream 1246925 13978171 ~ 13993044 (+)
LOC122355339 LOC107702424 other upstream 1335342 13894361 ~ 13904627 (+)
gucy2g gucy2g,LOC107702423,LOC107755438,LOC107722192,LOC107581632,LOC107684125,LOC107571103,LOC108273537 other upstream 1375226 13855695 ~ 13864743 (+)
si:dkey-21c1.4 LOC107755475,LOC107576597,LOC107690918 other downstream 67062 15307426 ~ 15312004 (+)
qki2 qki2,LOC108426533,LOC107755469,LOC107690925,LOC107601430,LOC103029551 other downstream 106181 15346545 ~ 15378101 (+)
LOC122355837 ndst2b,LOC107601424,LOC107755463,LOC107690932,LOC107749844,LOC107684097,LOC107561853,LOC108410510 other downstream 211130 15451494 ~ 15774014 (+)
baiap2b baiap2b,LOC107684102,LOC107749842,LOC107690938,LOC107755398,LOC108273716 other downstream 592920 15833284 ~ 15928026 (+)
LOC122355667 LOC107704244,LOC107753270,LOC107684139,LOC107561814,LOC107755395 other downstream 995571 16235935 ~ 16239783 (+)

Expression


Co-expression Network