G88603


Basic Information

Item Value
gene id G88603
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 15008498 ~ 15009558 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU131106
taatggaacatgatatttacttaatatcctaatgatttttggcacaaaagaaaaaaactataattctgacccatacaatgtatttttgtcttttgctaccaaggttttgtggtccagggtcacatttttcCCCTGCTTAAAAATCCTGAAATTCCACTATTATTGTCTACCGAAGTTTCGATATTGTTACAAGCTATTGGAAGATCAATTATTATACACGTGCATACATACCTGTGGACTGAAAGACGCCGGGATTGCACTGACAGTAACGCTGGGCGAAAGCCTCCATCATTCGATCGATCTTCTGAGCTTCACCCGGTAACCGAAAACTCCATAAAAACTGTTGAGTGCCTGAACCAGGTTGAGGTCTGTAAATTCATGAAGCTCCACGAAGGCATGAAGAACCTGAATATTGAACTCATCCCTGGAAATGAGATCAAATTGAGTAGGAGATTCAATCTTAGATCAACAGCGATGATGTTGCAGTGACATCTGGTGAAAAATGGTACAGCTCGATTTGTTTTTCCTTCAGGGCTTTCAAAGCAGTTTTATGATAAGCttgaactaaattaaatcagaaTTCTGTAAAGAAAAACCCCCCAAAGTGGACGCCACTAAAAACCTGGTCTACTGTAAAATTTGCAGCGTTCACTGTGAATGGAATTACGGCTGTGATCCTCCTCTCAGACGTCTCCAATGAGCATTAAATCTCACGGGAGGATTACGTCTGGGATTACTGTCCGTGTGTAACTAGCTCTTTCTTCAGTGAGGAAATGGGGCATGTCGATAATATCAATGAGCTCCGAATGCATTAACCCACTTCAGGGGACGTCCATTAAGCTCTGCACTCCTTCATCCAGTTCGCCACCGCCGTAACCTCGCTTCAGCAATGATCCTGGGATTCACTATTGATTTTCCTCAGGTGTCTCAGAAAATAACGCGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131106 True 944 lncRNA 0.42 2 15008498 15009558

Neighbor

gene id symbol gene type direction distance location
timp2a timp2a,LOC107755484,LOC107565802,LOC107684079,LOC107690949,LOC108274067 coding downstream 52708 14937033 ~ 14955790 (-)
arl3b arl3,LOC107684078,LOC102778022,LOC103145158,LOC103367836,LOC102201386 coding downstream 79442 14926593 ~ 14929056 (-)
sema4gb sema4g,LOC107755489,LOC107565799,LOC107722218,LOC107684071 coding downstream 117066 14868159 ~ 14891432 (-)
twnk peo1,LOC107755431,LOC107690904,LOC107565785,LOC107581591,LOC107722219,LOC107684073 coding downstream 143228 14860946 ~ 14865270 (-)
galk1 galk1,LOC107755403,LOC107581646,LOC107373028 coding downstream 147942 14856005 ~ 14860556 (-)
LOC122355486 pgs1,LOC107755482,LOC107690911,LOC107722233,LOC107684081,LOC107601408 coding upstream 7072 15016630 ~ 15035264 (-)
tmem235b si:ch73-369d14.2,LOC107690958,LOC107601440,LOC107755429,LOC107722204,LOC107684153,LOC107581678 coding upstream 73984 15083542 ~ 15089979 (-)
birc5a birc5a,birc5,LOC107684154,LOC107581679,LOC107722191,LOC107690959,LOC107755428 coding upstream 80575 15090133 ~ 15092148 (-)
fscn2b fscn2,fscn2b,LOC107722237,LOC107684083,LOC107581600 coding upstream 83523 15093081 ~ 15103375 (-)
bahcc1b bahcc1,LOC107581601,LOC107684084 coding upstream 134531 15144089 ~ 15239843 (-)
G88403 fasn,LOC107702482,LOC107579490 non-coding downstream 287264 14720515 ~ 14721234 (-)
G88381 NA non-coding downstream 299141 14706320 ~ 14709357 (-)
G88384 NA non-coding downstream 324198 14680917 ~ 14684300 (-)
G88355 NA non-coding downstream 609570 14398360 ~ 14398928 (-)
G88233 NA non-coding downstream 875360 14131919 ~ 14133138 (-)
G88605 cyth2,cyth1,LOC103381773,LOC107717468,LOC100709795 non-coding upstream 1365 15010923 ~ 15013151 (-)
LOC122355054 NA non-coding upstream 104521 15114079 ~ 15117307 (-)
G88635 NA non-coding upstream 236977 15246535 ~ 15247957 (-)
G88648 LOC107755474,LOC107690923,LOC107601434,LOC107684155,LOC107749866,LOC107581680 non-coding upstream 310969 15320527 ~ 15321751 (-)
G88659 NA non-coding upstream 327352 15336910 ~ 15337481 (-)
LOC122355209 NA other downstream 302247 14702568 ~ 14706251 (-)
G88365 NA other downstream 364718 14541566 ~ 14643780 (-)
G88250 LOC107702476 other downstream 858493 14148047 ~ 14150005 (-)
srsf2a srsf2,LOC107702465,LOC107566380,LOC107684046 other downstream 1031987 13972882 ~ 13976511 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107702422,LOC107750316,LOC107566231,LOC106949585,LOC106589326 other downstream 1317158 13609420 ~ 13691340 (-)
ndufaf8 NA other upstream 284275 15293833 ~ 15295240 (-)
si:dkey-21c1.1 tepsin,si:dkey-21c1.1,LOC107601406,LOC107755426,LOC107684135,LOC107749856,LOC107601412,LOC107581605,LOC107749858 other upstream 290739 15300297 ~ 15306509 (-)
bicral gltscr1l,LOC107690921,LOC107601433,LOC107749855,LOC107684087,LOC107581606 other upstream 301011 15310569 ~ 15319858 (-)
pmp22b pmp22,LOC107561836,LOC107684480,LOC107597829,LOC107692454,LOC107753252 other upstream 1590337 16599895 ~ 16609807 (-)
G88940 sdk2,sdk2b,LOC107721024,LOC107753272,LOC107597834 other upstream 1706861 16716419 ~ 16719298 (-)

Expression


Co-expression Network